Mercurial > repos > imgteam > color_deconvolution

diff color_deconvolution.py @ 1:0976b373a321 draft

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planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/color-deconvolution/ commit b2acc1845a25828181597fe5b6982fe116a7796d
author imgteam
date Mon, 22 Jul 2019 05:02:00 -0400
parents 8aa6e767f737
children 612aa1478fe1
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--- a/color_deconvolution.py	Sat Feb 09 14:32:37 2019 -0500
+++ b/color_deconvolution.py	Mon Jul 22 05:02:00 2019 -0400
@@ -74,7 +74,7 @@
 parser.add_argument('input_file', type=argparse.FileType('r'), default=sys.stdin, help='input file')
 parser.add_argument('out_file', type=argparse.FileType('w'), default=sys.stdin, help='out file (TIFF)')
 parser.add_argument('conv_type', choices=convOptions.keys(), help='conversion type')
-args = parser.parse_args()
+args = parser.parse_args() 
 
 img_in = skimage.io.imread(args.input_file.name)[:,:,0:3]
 res = convOptions[args.conv_type](img_in)