annotate image_info.xml @ 0:8c25d4ff0b51 draft

planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
author imgteam
date Fri, 19 Jul 2019 07:29:08 -0400
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8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
imgteam
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1 <tool id="ip_imageinfo" name="Image Info" version="0.1">
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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2 <description>Show Image Info</description>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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3 <requirements>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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4 <requirement type="package" version="5.7.1">bftools</requirement>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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5 </requirements>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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6 <command>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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7 <![CDATA[
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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8 showinf '$input_file' -no-upgrade -minmax -nopix > '$output'
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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9 ]]>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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10 </command>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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11 <inputs>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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12 <param label="Input Image" name="input_file" type="data" format="tiff,tif,png,jpeg,bmp"/>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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13 </inputs>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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14 <outputs>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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15 <data format="txt" name="output"/>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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16 </outputs>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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17 <tests>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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18 <test>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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19 <param name="input_file" value="input.tiff" />
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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20 <output name="output" value="res.txt" ftype="txt" compare="diff" lines_diff="6"/>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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21 </test>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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22 </tests>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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23 <help>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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24 **What it does**
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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25
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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26 Extracts metadata from an image.
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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27 </help>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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28 <citations>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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29 <citation type="doi">10.1016/j.jbiotec.2017.07.019</citation>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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30 </citations>
8c25d4ff0b51 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/image_info/ commit 982cc5470b2032b5b85077500c17a020d0d25fd6
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31 </tool>