Mercurial > repos > imgteam > imagej2_adjust_threshold_binary
comparison imagej2_smooth_jython_script.py @ 3:2b007b1e6c1b draft default tip
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/image_processing/imagej2 commit 8f49f3c66b5a1de99ec15e65c2519a56792f1d56
| author | imgteam |
|---|---|
| date | Wed, 25 Sep 2024 16:06:33 +0000 |
| parents | 29a4d422f32a |
| children |
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| 2:da29019170f1 | 3:2b007b1e6c1b |
|---|---|
| 2 | 2 |
| 3 from ij import IJ | 3 from ij import IJ |
| 4 | 4 |
| 5 # Fiji Jython interpreter implements Python 2.5 which does not | 5 # Fiji Jython interpreter implements Python 2.5 which does not |
| 6 # provide support for argparse. | 6 # provide support for argparse. |
| 7 error_log = sys.argv[-4] | |
| 8 input = sys.argv[-3] | 7 input = sys.argv[-3] |
| 9 tmp_output_path = sys.argv[-2] | 8 tmp_output_path = sys.argv[-2] |
| 10 output_datatype = sys.argv[-1] | 9 output_datatype = sys.argv[-1] |
| 11 | 10 |
| 12 # Open the input image file. | 11 # Open the input image file. |
