diff imagej2_create_image_jython_script.py @ 0:f1ba33cd9edf draft

"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/image_processing/imagej2 commit b08f0e6d1546caaf627b21f8c94044285d5d5b9c-dirty"

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/imagej2_create_image_jython_script.py	Tue Sep 17 17:09:25 2019 -0400
@@ -0,0 +1,14 @@
+import sys
+from ij import IJ
+
+# Fiji Jython interpreter implements Python 2.5 which does not
+# provide support for argparse.
+title = sys.argv[ -6 ]
+width = int( sys.argv[ -5 ] )
+height = int( sys.argv[ -4 ] )
+depth = int( sys.argv[ -3 ] )
+type = sys.argv[ -2 ].replace( '_', ' ' )
+tmp_image_path = sys.argv[ -1 ]
+
+imp = IJ.newImage( title, type, width, height, depth )
+IJ.save( imp, "%s" % tmp_image_path )