diff imagej2_create_image.xml @ 0:dc3935a0165a draft

"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/image_processing/imagej2 commit b08f0e6d1546caaf627b21f8c94044285d5d5b9c-dirty"

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/imagej2_create_image.xml	Tue Sep 17 16:57:52 2019 -0400
@@ -0,0 +1,67 @@
+<?xml version='1.0' encoding='UTF-8'?>
+<tool id="imagej2_create_image" name="Create new image" version="@WRAPPER_VERSION@.0">
+    <description></description>
+    <macros>
+        <import>imagej2_macros.xml</import>
+    </macros>
+    <expand macro="fiji_requirements" />
+    <command>
+<![CDATA[
+    python $__tool_directory__/imagej2_create_image.py
+    --width $width
+    --height $height
+    --depth $depth
+    --image_type $image_type
+    --image_title "$image_title"
+    --jython_script $__tool_directory__/imagej2_create_image_jython_script.py
+    --output_datatype $output_datatype
+    --out_fname "$output"
+]]>
+    </command>
+    <inputs>
+        <expand macro="image_type" />
+        <param name="image_title" type="text" label="Image title" help="Leave blank for no title" />
+        <param name="width" type="integer" value="512" min="1" label="Image width in pixels" />
+        <param name="height" type="integer" value="512" min="1" label="Image height in pixels" />
+        <param name="depth" type="integer" value="1" min="1" label="Image depth" help="Specifies the number of stack slices" />
+        <param name="output_datatype" type="select" label="Save as format">
+            <expand macro="image_datatypes" />
+        </param>
+    </inputs>
+    <outputs>
+        <data name="output" format="jpg">
+            <actions>
+                <action type="format">
+                    <option type="from_param" name="output_datatype" />
+                 </action>
+           </actions>
+       </data>
+    </outputs>
+    <tests>
+        <test>
+            <param name="image_type" value="8-bit_ramp" />
+            <param name="image_title" value="MyTitle" />
+            <param name="width" value="256" />
+            <param name="height" value="256" />
+            <param name="depth" value="1" />
+            <param name="output_datatype" value="jpg" />
+            <output name="output" file="create_image1.jpg" ftype="jpg" />
+        </test>
+    </tests>
+    <help>
+**What it does**
+
+<![CDATA[
+Creates a new image based on the following entries.
+
+- **Type** specifies the image type "8-bit", "16-bit", "32-bit" or "RGB" with options
+- **Title** is associated with the image, but not displayed in the image
+- **Width** specifies the width of the image in pixels
+- **Height** specifies the height of the image in pixels
+- **Depth** specifies the number of stack slices
+- **Format** specifies the image format "jpg", "png", etc
+]]>
+
+    </help>
+    <expand macro="fiji_headless_citations" />
+</tool>