comparison imagej2_binary_to_edm_jython_script.py @ 2:756e062741dc draft default tip

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/image_processing/imagej2 commit 57a0433defa3cbc37ab34fbb0ebcfaeb680db8d5

1:7a44772cc89f

# Create a copy of the image.
input_image_plus_copy = input_image_plus.duplicate()
image_processor_copy = input_image_plus_copy.getProcessor()

# Set binary options.
options_list = ['edm=Overwrite', 'iterations=%d' % iterations, 'count=%d' % count]
if black_background:
    options_list.append("black")
if pad_edges_when_eroding:
    options_list.append("pad")
options = " ".join(options_list)

2:756e062741dc

# Create a copy of the image.
input_image_plus_copy = input_image_plus.duplicate()
image_processor_copy = input_image_plus_copy.getProcessor()

# Set binary options.
options_list = ["edm=Overwrite", "iterations=%d" % iterations, "count=%d" % count]
if black_background:
    options_list.append("black")
if pad_edges_when_eroding:
    options_list.append("pad")
options = " ".join(options_list)