Mercurial > repos > imgteam > imagej2_shadows
comparison imagej2_find_edges_jython_script.py @ 3:f7ae316b00e4 draft default tip
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/image_processing/imagej2 commit 8f49f3c66b5a1de99ec15e65c2519a56792f1d56
author | imgteam |
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date | Wed, 25 Sep 2024 16:02:30 +0000 |
parents | c8bb47840c8d |
children |
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2:f3c9192bd0b9 | 3:f7ae316b00e4 |
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2 | 2 |
3 from ij import IJ | 3 from ij import IJ |
4 | 4 |
5 # Fiji Jython interpreter implements Python 2.5 which does not | 5 # Fiji Jython interpreter implements Python 2.5 which does not |
6 # provide support for argparse. | 6 # provide support for argparse. |
7 error_log = sys.argv[-4] | |
8 input = sys.argv[-3] | 7 input = sys.argv[-3] |
9 tmp_output_path = sys.argv[-2] | 8 tmp_output_path = sys.argv[-2] |
10 output_datatype = sys.argv[-1] | 9 output_datatype = sys.argv[-1] |
11 | 10 |
12 # Open the input image file. | 11 # Open the input image file. |