Mercurial > repos > imgteam > imagej2_skeletonize3d
diff imagej2_find_maxima_jython_script.py @ 3:5f5b7185bc16 draft default tip
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/image_processing/imagej2 commit 8f49f3c66b5a1de99ec15e65c2519a56792f1d56
author | imgteam |
---|---|
date | Wed, 25 Sep 2024 16:14:34 +0000 |
parents | 49b5288dcd8c |
children |
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--- a/imagej2_find_maxima_jython_script.py Sun Nov 05 14:26:52 2023 +0000 +++ b/imagej2_find_maxima_jython_script.py Wed Sep 25 16:14:34 2024 +0000 @@ -6,7 +6,6 @@ # Fiji Jython interpreter implements Python 2.5 which does not # provide support for argparse. -error_log = sys.argv[-10] input_file = sys.argv[-9] scale_when_converting = sys.argv[-8] == "yes" weighted_rgb_conversions = sys.argv[-7] == "yes" @@ -35,7 +34,7 @@ if weighted_rgb_conversions: options.append("weighted") # Perform conversion - must happen even if no options are set. -IJ.run(input_image_plus_copy, "Conversions...", "%s" % " ".join(options)) +IJ.run(input_image_plus_copy, "Conversions...", " %s" % " ".join(options)) if output_type in ["List", "Count"]: # W're generating a tabular file for the output. # Set the Find Maxima options.