comparison imagej2_watershed_binary.xml @ 2:aeae7e29d525 draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/image_processing/imagej2 commit 57a0433defa3cbc37ab34fbb0ebcfaeb680db8d5
author imgteam
date Sun, 05 Nov 2023 10:47:25 +0000
parents 5b154339fd90
children 29aca8eebdaa
comparison
equal deleted inserted replaced
1:5b154339fd90 2:aeae7e29d525
1 <tool id="imagej2_watershed_binary" name="Watershed segmentation" version="@WRAPPER_VERSION@.1"> 1 <tool id="imagej2_watershed_binary" name="Perform segmentation using watershed transformation" version="@WRAPPER_VERSION@.2">
2 <description>of binary image</description> 2 <description>with ImageJ2</description>
3 <macros> 3 <macros>
4 <import>imagej2_macros.xml</import> 4 <import>imagej2_macros.xml</import>
5 </macros> 5 </macros>
6 <edam_operations>
7 <edam_operation>operation_3443</edam_operation>
8 </edam_operations>
9 <xrefs>
10 <xref type="bio.tools">imagej</xref>
11 <xref type="biii">imagej2</xref>
12 </xrefs>
6 <expand macro="fiji_requirements"/> 13 <expand macro="fiji_requirements"/>
7 <command detect_errors="exit_code"><![CDATA[ 14 <command detect_errors="exit_code"><![CDATA[
8 #import os 15 #import os
9 #set error_log = 'output_log.txt' 16 #set error_log = 'output_log.txt'
10 touch '$error_log' && 17 touch '$error_log' &&