diff imagej2_create_image_jython_script.py @ 1:5b154339fd90 draft default tip

"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/image_processing/imagej2 commit 2afb24f3c81d625312186750a714d702363012b5"
author imgteam
date Mon, 28 Sep 2020 16:36:30 +0000
parents b143159845b4
children
line wrap: on
line diff
--- a/imagej2_create_image_jython_script.py	Tue Sep 17 17:02:55 2019 -0400
+++ b/imagej2_create_image_jython_script.py	Mon Sep 28 16:36:30 2020 +0000
@@ -1,14 +1,15 @@
 import sys
+
 from ij import IJ
 
 # Fiji Jython interpreter implements Python 2.5 which does not
 # provide support for argparse.
-title = sys.argv[ -6 ]
-width = int( sys.argv[ -5 ] )
-height = int( sys.argv[ -4 ] )
-depth = int( sys.argv[ -3 ] )
-type = sys.argv[ -2 ].replace( '_', ' ' )
-tmp_image_path = sys.argv[ -1 ]
+title = sys.argv[-6]
+width = int(sys.argv[-5])
+height = int(sys.argv[-4])
+depth = int(sys.argv[-3])
+type = sys.argv[-2].replace('_', ' ')
+tmp_image_path = sys.argv[-1]
 
-imp = IJ.newImage( title, type, width, height, depth )
-IJ.save( imp, "%s" % tmp_image_path )
+imp = IJ.newImage(title, type, width, height, depth)
+IJ.save(imp, "%s" % tmp_image_path)