diff labelimage2points.xml @ 0:39e6d6a84257 draft

planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/labelimage2points/ commit c3f4b766f03770f094fda6bda0a5882c0ebd4581

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/labelimage2points.xml	Sat Feb 09 14:36:17 2019 -0500
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+<tool id="ip_labelimage_to_points" name="Label to Points" version="0.1">
+    <description>Converts label image to points</description>
+    <requirements>
+        <requirement type="package" version="0.14.2">scikit-image</requirement>
+        <requirement type="package" version="0.21.0">pandas</requirement>
+    </requirements>
+    <command>
+        <![CDATA[
+        python '$__tool_directory__/labelimage2points.py' '$input' '$output'
+        ]]>
+    </command>
+    <inputs>
+        <param name="input" type="data" format="tiff,png,jpg,bmp" label="Label image file"/>
+    </inputs>
+    <outputs>
+        <data format="tabular" name="output"/>
+    </outputs>
+    <tests>
+        <test>
+            <param name="input" value="label.tif" />
+            <output name="output" value="points.tsv" ftype="tabular" />
+        </test>
+    </tests>
+    <help>
+    **What it does**
+
+    Calculates the center of mass for all differently colored regions in the image.
+    </help>
+    <citations>
+        <citation type="doi">10.1016/j.jbiotec.2017.07.019</citation>
+    </citations>
+</tool>