view landmark_registration_ls.xml @ 1:69db8c7d4244 draft default tip

"planemo upload for repository commit 927b78d47c31714776ccdf3d16f26c3779298abb"
author imgteam
date Sun, 20 Feb 2022 15:47:16 +0000
parents 2f36165c49fb
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<tool id="ip_landmark_registration_ls" name="Landmark Registration" version="0.0.2" profile="20.05">
    <description>using least squares</description>
        <requirement type="package" version="1.2.1">scipy</requirement>
        <requirement type="package" version="0.23.4">pandas</requirement>
        <requirement type="package" version="1.15.2">numpy</requirement>
    <command detect_errors="aggressive">
         python '$__tool_directory__/'
          <param name="fn_pts1" type="data" format="tabular" label="Path to tab-separated file with src points" />
          <param name="fn_pts2" type="data" format="tabular" label="Path to tab-separated file with dst points" />
       <data format="tabular" name="fn_tmat" />
            <param name="fn_pts1" value="points1.tsv"/>
            <param name="fn_pts2" value="points2.tsv"/>
            <output name="fn_tmat" value="tmat.tsv" ftype="tabular" compare="diff" lines_diff="6"/>
    **What it does**

    This tool estimates the (affine) transformation matrix using least squares given two sets of 2d coordinates of landmarks.

    Note: This tool is deprecated and may not be supported in future. Please use the tool "Landmark Registration" instead.