Mercurial > repos > imgteam > mergeneighboursinlabelimage
comparison mergeneighboursinlabelimage.py @ 1:c6a6ab7c9940 draft
planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/\mergeneighboursinlabelimage commit b2acc1845a25828181597fe5b6982fe116a7796d
| author | imgteam |
|---|---|
| date | Mon, 22 Jul 2019 05:03:33 -0400 |
| parents | 07ac39c0e949 |
| children | 9cbddb13fb9e |
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| 0:07ac39c0e949 | 1:c6a6ab7c9940 |
|---|---|
| 3 import skimage.io | 3 import skimage.io |
| 4 import skimage.util | 4 import skimage.util |
| 5 from skimage.measure import regionprops | 5 from skimage.measure import regionprops |
| 6 import scipy.spatial.distance | 6 import scipy.spatial.distance |
| 7 import numpy as np | 7 import numpy as np |
| 8 import warnings | 8 import warnings |
| 9 | 9 |
| 10 def merge_n(img, dist=50): | 10 def merge_n(img, dist=50): |
| 11 props = regionprops(img) | 11 props = regionprops(img) |
| 12 found = False | 12 found = False |
| 13 for i in range(0, len(props)): | 13 for i in range(0, len(props)): |