annotate projective_transformation_points.xml @ 3:a84822a0060c draft

"planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/projective_transformation_points/ commit 220e44642b9998e649b51904cf973b61a8161c18"
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date Fri, 08 May 2020 05:22:34 -0400
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0d2707c82d29 "planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/projective_transformation_points/ commit f1298dca5a7f5be3acbb5e3d80c98b1cd6d2795b"
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1 <tool id="ip_projective_transformation_points" name="Projective Transformation" version="0.0.4">
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2 <description>of input points</description>
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3 <requirements>
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4 <requirement type="package" version="0.14.2">scikit-image</requirement>
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5 <requirement type="package" version="1.2.1">scipy</requirement>
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6 <requirement type="package" version="0.23.4">pandas</requirement>
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7 <requirement type="package" version="1.15.2">numpy</requirement><!--conflict of 1.15.4 with mkl_fft!?-->
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8 <requirement type="package" version="0.15.1">tifffile</requirement>
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9 </requirements>
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10 <command>
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11 <![CDATA[
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12 python '$__tool_directory__/projective_transformation_points.py'
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13 '$moving_points'
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14 '$warp_matrix'
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15 '$out'
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16 ]]>
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17 </command>
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18 <inputs>
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19 <param name="moving_points" type="data" format="tabular" label="Moving Points" />
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20 <param name="warp_matrix" type= "data" format="tabular" label="Warp Matrix" />
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21 </inputs>
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22 <outputs>
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23 <data format="tabular" name="out" />
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24 </outputs>
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25 <tests>
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26 <test>
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27 <param name="moving_points" value="points_tsv.tsv" />
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28 <param name="warp_matrix" value="warp_matrix.tsv" />
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29 <output name="out" value="out.tsv" ftype="tabular" />
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30 </test>
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31 </tests>
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32 <help>
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33 **What it does**
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34
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35 This tool performs a projective transformation of the input (moving) points.
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36 </help>
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37 <citations>
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38 <citation type="doi">10.1016/j.jbiotec.2017.07.019</citation>
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39 </citations>
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40 </tool>