diff projective_transformation_points.xml @ 0:ed8a71e13f7b draft

planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/projective_transformation_points/ commit c3f4b766f03770f094fda6bda0a5882c0ebd4581
author imgteam
date Sat, 09 Feb 2019 14:45:19 -0500
parents
children f1744c5654b9
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/projective_transformation_points.xml	Sat Feb 09 14:45:19 2019 -0500
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+<tool id="ip_projective_transformation_points" name="Projective Transformation" version="0.0.2">
+    <description>of input points</description>
+    <requirements>
+        <requirement type="package" version="0.14.2">scikit-image</requirement>
+        <requirement type="package" version="0.23.4">pandas</requirement>
+        <requirement type="package" version="1.15.2">numpy</requirement><!--conflict of 1.15.4 with mkl_fft!?-->
+    </requirements>
+    <command>
+    <![CDATA[
+        python '$__tool_directory__/projective_transformation_points.py'
+            '$moving_points'
+            '$warp_matrix'
+            '$out'
+    ]]>
+    </command>
+    <inputs>
+        <param name="moving_points" type="data" format="tabular" label="Moving Points" />
+        <param name="warp_matrix" type= "data" format="tabular" label="Warp Matrix" />
+    </inputs>
+    <outputs>
+       <data format="tabular" name="out" />
+    </outputs>
+    <tests>
+      <test>
+        <param name="moving_points" value="points_tsv.tsv" />
+        <param name="warp_matrix" value="warp_matrix.tsv" />
+        <output name="out" value="out.tsv" ftype="tabular" />
+      </test>
+    </tests>
+    <help>
+    **What it does**
+
+    This tool performs a projective transformation of the input (moving) points.
+    </help>
+    <citations>
+        <citation type="doi">10.1016/j.jbiotec.2017.07.019</citation>
+    </citations>
+</tool>