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"planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/projective_transformation_points/ commit 7391bb4256f49ec30cf38d9438f97e11ec25a115"
author imgteam
date Wed, 23 Dec 2020 23:56:29 +0000
parents 0d2707c82d29
children 3a686b6aa7fc
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<tool id="ip_projective_transformation_points" name="Projective Transformation" version="0.1.0">
    <description>of input points</description>
    <requirements>
        <requirement type="package" version="0.14.2">scikit-image</requirement>
        <requirement type="package" version="1.2.1">scipy</requirement>
        <requirement type="package" version="0.23.4">pandas</requirement>
        <requirement type="package" version="1.15.2">numpy</requirement>
        <requirement type="package" version="0.15.1">tifffile</requirement>
    </requirements>
    <command>
    <![CDATA[
        python '$__tool_directory__/projective_transformation_points.py'
            '$moving_points'
            '$warp_matrix'
            '$out'
    ]]>
    </command>
    <inputs>
        <param name="moving_points" type="data" format="tabular" label="Moving Points" />
        <param name="warp_matrix" type= "data" format="tabular" label="Warp Matrix" />
    </inputs>
    <outputs>
       <data format="tabular" name="out" />
    </outputs> 
    <tests>
      <test>
        <param name="moving_points" value="points_tsv.tsv" />
        <param name="warp_matrix" value="warp_matrix.tsv" />
        <output name="out" value="out.tsv" ftype="tabular" />
      </test>
    </tests>
    <help>
    **What it does**

    This tool performs a projective transformation of the input (moving) points (with/without labels).
    </help>
    <citations>
        <citation type="doi">10.1016/j.jbiotec.2017.07.019</citation>
    </citations>
</tool>