Mercurial > repos > imgteam > projective_transformation_points
changeset 1:f1744c5654b9 draft
planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/projective_transformation_points/ commit 201f4231192bc368b14e72bb1314b9a97b8db8d0
| author | imgteam |
|---|---|
| date | Wed, 27 Mar 2019 14:54:32 -0400 |
| parents | ed8a71e13f7b |
| children | 0d2707c82d29 |
| files | projective_transformation_points.py projective_transformation_points.xml test-data/out.tsv |
| diffstat | 3 files changed, 10 insertions(+), 10 deletions(-) [+] |
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--- a/projective_transformation_points.py Sat Feb 09 14:45:19 2019 -0500 +++ b/projective_transformation_points.py Wed Mar 27 14:54:32 2019 -0400 @@ -5,12 +5,12 @@ def warp_coords_batch(coord_map, coords, dtype=np.float64, batch_size=1000000): - tf_coords = coords.astype(np.float32) + tf_coords = coords.astype(np.float32)[:, ::-1] - for i in range(0, (tf_coords.shape[0]//batch_size+1)): + for i in range(0, (tf_coords.shape[0]//batch_size)+1): tf_coords[batch_size*i:batch_size*(i+1)] = coord_map(tf_coords[batch_size*i:batch_size*(i+1)]) - return np.unique(np.round(tf_coords).astype(coords.dtype),axis=0) + return np.unique(np.round(tf_coords).astype(coords.dtype),axis=0)[:, ::-1] def transform(coords, warp_matrix, out):
--- a/projective_transformation_points.xml Sat Feb 09 14:45:19 2019 -0500 +++ b/projective_transformation_points.xml Wed Mar 27 14:54:32 2019 -0400 @@ -1,4 +1,4 @@ -<tool id="ip_projective_transformation_points" name="Projective Transformation" version="0.0.2"> +<tool id="ip_projective_transformation_points" name="Projective Transformation" version="0.0.3"> <description>of input points</description> <requirements> <requirement type="package" version="0.14.2">scikit-image</requirement>