comparison slice_image.py @ 4:a72590196440 draft default tip

planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/slice_image/ commit c86a1b93cb7732f7331a981d13465653cc1a2790

3:1faa7e3c94ff

import argparse
import os.path
import random
import warnings

import numpy as np
import skimage.feature
import skimage.io
import skimage.util

    # Primarily for testing purposes
    if seed is not None:
        random.seed(seed)

    img_raw = skimage.io.imread(input_file)
    if len(img_raw.shape) == 2:
        img_raw = np.expand_dims(img_raw, 3)

    with warnings.catch_warnings():  # ignore FutureWarning
        warnings.simplefilter("ignore")

4:a72590196440

import argparse
import os.path
import random
import warnings

import giatools.io
import numpy as np
import skimage.feature
import skimage.io
import skimage.util

    # Primarily for testing purposes
    if seed is not None:
        random.seed(seed)

    img_raw = giatools.io.imread(input_file)
    if len(img_raw.shape) == 2:
        img_raw = np.expand_dims(img_raw, 3)

    with warnings.catch_warnings():  # ignore FutureWarning
        warnings.simplefilter("ignore")