Mercurial > repos > imgteam > superdsm
diff run-superdsm.py @ 2:244f67290d28 draft
planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/superdsm/ commit 2286a6c9da88596349ed9d967c51541409c0a7bf
author | imgteam |
---|---|
date | Mon, 13 Nov 2023 22:12:35 +0000 |
parents | 700ae37e5c69 |
children | 7fd8dba15bd3 |
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--- a/run-superdsm.py Thu Jul 06 00:01:18 2023 +0000 +++ b/run-superdsm.py Mon Nov 13 22:12:35 2023 +0000 @@ -13,11 +13,6 @@ import shutil import tempfile -import ray -import superdsm.automation -import superdsm.io -import superdsm.render - hyperparameters = [ ('AF_scale', float), @@ -71,7 +66,11 @@ os.environ['MKL_NUM_THREADS'] = str(num_threads_per_process) os.environ['OPENBLAS_NUM_THREADS'] = str(num_threads_per_process) - os.environ['MKL_DEBUG_CPU_TYPE'] = '5' + + import ray + import superdsm.automation + import superdsm.io + import superdsm.render ray.init(num_cpus=num_processes, log_to_driver=True)