comparison visceral-evaluatesegmentation.xml @ 2:4d042d197ac3 draft default tip

planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/visceral-evaluatesegmentation commit 6b687746bdb3d5d1fb11ecffd6dd1bf42dc2c38d

1:d098aed00229

<tool id="ip_visceral_evaluatesegmentation" name="Visceral" version="0.5">
    <description>Evaluate Segmentation</description>
    <requirements>
        <!--requirement type="package" version="9c">jpeg</requirement-->
        <!--requirement type="package" version="4.13.0">libitk</requirement-->
        <requirement type="package" version="2015.07.03">visceral-evaluatesegmentation</requirement>
    </requirements>
    <command>
        <![CDATA[
        EvaluateSegmentation '$gt_path' '$seg_path' -xml '$output'
        ]]>
    </command>
    <inputs>
        <param name="gt_path" type="data" format="tiff,png,jpg,bmp" label="Ground Truth Image"/>
        <param name="seg_path" type="data" format="tiff,png,jpg,bmp" label="Segmented Image"/>
    </inputs>

2:4d042d197ac3

<tool id="ip_visceral_evaluatesegmentation" name="Evaluate segmentation" version="0.5-2">
    <description>with EvaluateSegmentation</description>
    <edam_operations>
        <edam_operation>operation_3443</edam_operation>
    </edam_operations>
    <xrefs>
        <xref type="biii">evaluatesegmentation-tool</xref>
    </xrefs>
    <requirements>
        <requirement type="package" version="2015.07.03">visceral-evaluatesegmentation</requirement>
    </requirements>
    <command>
        <![CDATA[
        EvaluateSegmentation '$gt_path' '$seg_path' -xml '$output'
        ]]> 
    </command>
    <inputs>
        <param name="gt_path" type="data" format="tiff,png,jpg,bmp" label="Ground Truth Image"/>
        <param name="seg_path" type="data" format="tiff,png,jpg,bmp" label="Segmented Image"/>
    </inputs>