Mercurial > repos > imgteam > visceral_evaluatesegmentation

changeset 2:4d042d197ac3 draft default tip

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planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/visceral-evaluatesegmentation commit 6b687746bdb3d5d1fb11ecffd6dd1bf42dc2c38d
author imgteam
date Fri, 10 Nov 2023 14:23:38 +0000
parents d098aed00229
children
files visceral-evaluatesegmentation.xml
diffstat 1 files changed, 9 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/visceral-evaluatesegmentation.xml	Wed Mar 20 09:18:21 2019 -0400
+++ b/visceral-evaluatesegmentation.xml	Fri Nov 10 14:23:38 2023 +0000
@@ -1,14 +1,18 @@
-<tool id="ip_visceral_evaluatesegmentation" name="Visceral" version="0.5">
-    <description>Evaluate Segmentation</description>
+<tool id="ip_visceral_evaluatesegmentation" name="Evaluate segmentation" version="0.5-2">
+    <description>with EvaluateSegmentation</description>
+    <edam_operations>
+        <edam_operation>operation_3443</edam_operation>
+    </edam_operations>
+    <xrefs>
+        <xref type="biii">evaluatesegmentation-tool</xref>
+    </xrefs>
     <requirements>
-        <!--requirement type="package" version="9c">jpeg</requirement-->
-        <!--requirement type="package" version="4.13.0">libitk</requirement-->
         <requirement type="package" version="2015.07.03">visceral-evaluatesegmentation</requirement>
     </requirements>
     <command>
         <![CDATA[
         EvaluateSegmentation '$gt_path' '$seg_path' -xml '$output'
-        ]]>
+        ]]> 
     </command>
     <inputs>
         <param name="gt_path" type="data" format="tiff,png,jpg,bmp" label="Ground Truth Image"/>