Mercurial > repos > immuneml > immuneml_tools
diff README.rst @ 5:48569213d91c draft
"planemo upload commit 49b58953ab7eec02a6917044be672ad9a65eab5c-dirty"
author | immuneml |
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date | Fri, 02 Jul 2021 11:04:53 +0000 |
parents | ed3932e6d616 |
children | 2d3dd9ff7e84 |
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--- a/README.rst Thu Jul 01 17:18:18 2021 +0000 +++ b/README.rst Fri Jul 02 11:04:53 2021 +0000 @@ -1,5 +1,9 @@ -Installation +Dependencies ============ +The tools rely on immuneML version 2.0.1 or newer. + +Installation: datatype +====================== You will need to define a new datatype ``immuneml_receptors``, which is done as follows: 1. In your ``galaxy.yml`` look up the name of your ``datatypes_config_file``. If the name is not yet defined, set @@ -12,6 +16,6 @@ ``<datatype extension="immuneml_receptors" type="galaxy.datatypes.text:Html" subclass="True"/>`` The line has to be inside ``<registration>`` along with the other datatypes. -The immuneML conda package -========================== -Galaxy will need to install the immuneML conda package. This conda installation typically takes several minutes. +Installation: The immuneML package +================================== +Conda installation of immuneML typically takes several minutes. There is general information about Galaxy's dependency resolution here: https://docs.galaxyproject.org/en/release_20.05/admin/conda_faq.html