# HG changeset patch # User immuneml # Date 1625223893 0 # Node ID 48569213d91c765729e3a287179cdf2923f752d0 # Parent 697bb1a18bc70a07cb99b1cfacb0b3e15de34eb5 "planemo upload commit 49b58953ab7eec02a6917044be672ad9a65eab5c-dirty" diff -r 697bb1a18bc7 -r 48569213d91c README.md --- a/README.md Thu Jul 01 17:18:18 2021 +0000 +++ b/README.md Fri Jul 02 11:04:53 2021 +0000 @@ -1,5 +1,6 @@ # immuneml_tools -Galaxy tool wrappers for immuneML. +Galaxy tool wrappers for immuneML. The tools rely on immuneML version 2.0.1 or newer. + https://immuneml.uio.no/ ## Installation: @@ -19,5 +20,5 @@ ``` The line has to be inside `` along with the other datatypes. -### The immuneML conda package -Galaxy will need to install the immuneML conda package. This conda installation typically takes several minutes. +### The immuneML package +Conda installation of immuneML typically takes several minutes. There is general information about Galaxy's dependency resolution here: https://docs.galaxyproject.org/en/release_20.05/admin/conda_faq.html diff -r 697bb1a18bc7 -r 48569213d91c README.rst --- a/README.rst Thu Jul 01 17:18:18 2021 +0000 +++ b/README.rst Fri Jul 02 11:04:53 2021 +0000 @@ -1,5 +1,9 @@ -Installation +Dependencies ============ +The tools rely on immuneML version 2.0.1 or newer. + +Installation: datatype +====================== You will need to define a new datatype ``immuneml_receptors``, which is done as follows: 1. In your ``galaxy.yml`` look up the name of your ``datatypes_config_file``. If the name is not yet defined, set @@ -12,6 +16,6 @@ ```` The line has to be inside ```` along with the other datatypes. -The immuneML conda package -========================== -Galaxy will need to install the immuneML conda package. This conda installation typically takes several minutes. +Installation: The immuneML package +================================== +Conda installation of immuneML typically takes several minutes. There is general information about Galaxy's dependency resolution here: https://docs.galaxyproject.org/en/release_20.05/admin/conda_faq.html