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1 <tool id="cravat_submit" name="CRAVAT Submit, Check, and Retrieve" version="0.1.0">
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2 <description>Submits, checks for, and retrieves data for cancer annotation</description>
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3 <command interpreter="python">cravat_submit.py $input $dropdown $output</command>
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4
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5
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6 <inputs>
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7
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8 <param format="tabular" name="input" type="data" label="Source file"> </param>
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9 <param format="tabular" name="dropdown" type="select" label="Analysis Program">
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10 <option value="None">None</option>
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11 <option value="VEST">VEST</option>
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12 <option value="CHASM">CHASM</option>
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13 <option value="VEST;CHASM">VEST and CHASM</option>
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14 </param>
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15
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16
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17 </inputs>
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18
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19 <outputs>
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20 <data format="tabular" name="output" />
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21 </outputs>
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22
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23 <tests>
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24 <test>
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25 <param name="input" value="fa_gc_content_input.fa"/>
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26 <output name="out_file1" file="fa_gc_content_output.txt"/>
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27 </test>
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28 </tests>
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29
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30 <help>
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31 This tool submits, checks for, and retrieves data for cancer annotation.
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32 </help>
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33
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34 </tool>
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