Mercurial > repos > in_silico > cravat_annotate_mutations
comparison cravat_annotate/cravat_annotate.xml @ 22:e05043fbb945 draft
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author | in_silico |
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date | Wed, 27 Jun 2018 17:53:25 -0400 |
parents | c5b3d80c43e6 |
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21:94fdd28c0dbb | 22:e05043fbb945 |
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1 <tool id="cravat_query" name="CRAVAT Query" version="1.0.0"> | |
2 <description>Queries CRAVAT for cancer annotation</description> | |
3 <command interpreter="python">cravat_annotate.py -i $input -o $output</command> | |
4 | |
5 <inputs> | |
6 <param format="tabular" name="input" type="data" label="Source file"/> | |
7 </inputs> | |
8 | |
9 <outputs> | |
10 <data format="tabular" name="output" /> | |
11 </outputs> | |
12 | |
13 <tests> | |
14 <test> | |
15 <param name="input" value="input_call.txt"/> | |
16 <output name="output" file="Galaxy23-[CRAVAT_Query_on_data_22].tabular"/> | |
17 </test> | |
18 </tests> | |
19 | |
20 <help> | |
21 This tool queries CRAVAT for cancer annotation. | |
22 </help> | |
23 | |
24 </tool> | |
25 |