Mercurial > repos > in_silico > cravat_score_and_annotate
comparison cravat_submit/cravat_submit.xml @ 11:ae65a43ed658 draft
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author | in_silico |
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date | Wed, 27 Jun 2018 17:54:15 -0400 |
parents | 3439857aa913 |
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10:435b5bb17d01 | 11:ae65a43ed658 |
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1 <tool id="cravat_submit" name="CRAVAT Submit, Check, and Retrieve" version="0.1.0"> | |
2 <description>Submits, checks for, and retrieves data for cancer annotation</description> | |
3 <command interpreter="python">cravat_submit.py $input $dropdown $output</command> | |
4 | |
5 | |
6 <inputs> | |
7 | |
8 <param format="tabular" name="input" type="data" label="Source file"> </param> | |
9 <param format="tabular" name="dropdown" type="select" label="Analysis Program"> | |
10 <option value="None">None</option> | |
11 <option value="VEST">VEST</option> | |
12 <option value="CHASM">CHASM</option> | |
13 <option value="VEST;CHASM">VEST and CHASM</option> | |
14 </param> | |
15 | |
16 | |
17 </inputs> | |
18 | |
19 <outputs> | |
20 <data format="tabular" name="output" /> | |
21 </outputs> | |
22 | |
23 <tests> | |
24 <test> | |
25 <param name="input" value="fa_gc_content_input.fa"/> | |
26 <output name="out_file1" file="fa_gc_content_output.txt"/> | |
27 </test> | |
28 </tests> | |
29 | |
30 <help> | |
31 This tool submits, checks for, and retrieves data for cancer annotation. | |
32 </help> | |
33 | |
34 </tool> |