Mercurial > repos > insilico-bob > mean_center_matrix

diff meancentermatrix.xml @ 2:621af44576a2 draft

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author insilico-bob
date Thu, 26 Jan 2017 12:14:01 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/meancentermatrix.xml	Thu Jan 26 12:14:01 2017 -0500
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+<?xml version="1.0" encoding="UTF-8" ?>
+    <tool id='meancentermatrix' name='meancentermatrix' >
+	  <description>Mean Center Sample N columns and Value X Rows matrix avg based on rows</description>
+	  <command interpreter="python">meancentermatrix.py  '$input1' '$outfile'   </command>
+	  <inputs>
+			<param format="text" name="input1" type="data" label="Input Matrix" help="Input tab delimited matrix with a 1st row of Sample IDs and 1st column with labels for values to be mean-centered"/>
+	  </inputs>
+	  <outputs>
+			<data format="text"  name="outfile"/>
+	  </outputs>
+  <tests>
+    <test>
+      <param name='input1' value='test_input.txt' />
+      <output name='outfile' file='test_output.txt' />
+    </test>
+  </tests>
+  <help>This tool mean-centered an array with the row mean value</help>
+</tool>
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