Mercurial > repos > iracooke > msgfplus

diff msgfplus_search.xml @ 3:0cfe768bbda1

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Fixed tool wrapper
author iracooke
date Mon, 04 Mar 2013 20:33:35 -0500
parents 50002ff2c1f3
children 366e62d86881
line wrap: on
line diff
--- a/msgfplus_search.xml	Mon Mar 04 20:25:08 2013 -0500
+++ b/msgfplus_search.xml	Mon Mar 04 20:33:35 2013 -0500
@@ -8,17 +8,6 @@
 
 	<description>Run an MSGF+ Search</description>
 
-
-
-	<description>Run an X!Tandem Search</description>
-
-	<command>
-		#if $database.source_select=="built_in":
-		rvm 1.9.3@protk-1.1.9 do tandem_search.rb -d $database.dbkey 
-		#else #rvm 1.9.3@protk-1.1.9 do tandem_search.rb -d $database.fasta_file
-		#end if
-
-
 	<command>
 		#if $database.source_select=="built_in":
 		rvm 1.9.3@protk-1.1.9 do msgfplus_search.rb --galaxy -d $database.dbkey