Mercurial > repos > iracooke > omssa
view tool-data/omssa_mods.loc.sample @ 0:5e1594a15956
Uploaded
| author | iracooke |
|---|---|
| date | Sun, 06 Jan 2013 20:03:20 -0500 |
| parents | |
| children |
line wrap: on
line source
#This file lists the names of chemical modifications accepted by OMMSA # # 2-amino-3-oxo-butanoic acid T 2-amino-3-oxo-butanoicacidt_ 23 2-amino-3-oxo-butanoicacidt_ Asparagine HexNAc asparaginehexnac_ 182 asparaginehexnac_ Asparagine dHexHexNAc asparaginedhexhexnac_ 183 asparaginedhexhexnac_ CAMthiopropanoyl K camthiopropanoylk_ 131 camthiopropanoylk_ CHD2-di-methylation of K chd2-di-methylationofk_ 189 chd2-di-methylationofk_ CHD2-di-methylation of peptide n-term chd2-di-methylationofpeptiden-term_ 190 chd2-di-methylationofpeptiden-term_ ICAT heavy icatheavy_ 130 icatheavy_ ICAT light icatlight_ 129 icatlight_ M cleavage from protein n-term mcleavagefromproteinn-term_ 9 mcleavagefromproteinn-term_ MMTS on C mmtsonc_ 179 mmtsonc_ Maleimide-PEO2-Biotin of C maleimide-peo2-biotinofc_ 191 maleimide-peo2-biotinofc_ NEM C nemc_ 83 nemc_ NIPCAM nipcam_ 84 nipcam_ O18 on peptide n-term o18onpeptiden-term_ 87 o18onpeptiden-term_ PNGasF in O18 water pngasfino18water_ 139 pngasfino18water_ SeMet semet_ 113 semet_ Serine HexNAc serinehexnac_ 184 serinehexnac_ TMT 6-plex on K tmt6-plexonk_ 198 tmt6-plexonk_ TMT 6-plex on n-term peptide tmt6-plexonn-termpeptide_ 199 tmt6-plexonn-termpeptide_ Threonine HexNAc threoninehexnac_ 185 threoninehexnac_ Uniblue A on K uniblueaonk_ 195 uniblueaonk_ acetylation of K acetylationofk_ 24 acetylationofk_ acetylation of protein n-term acetylationofproteinn-term_ 10 acetylationofproteinn-term_ amidation of peptide c-term amidationofpeptidec-term_ 25 amidationofpeptidec-term_ arginine to ornithine argininetoornithine_ 163 argininetoornithine_ beta elimination of S betaeliminationofs_ 140 betaeliminationofs_ beta elimination of T betaeliminationoft_ 141 betaeliminationoft_ beta methythiolation of D betamethythiolationofd_ 13 betamethythiolationofd_ beta-carboxylation of D beta-carboxylationofd_ 47 beta-carboxylationofd_ beta-methylthiolation of D (duplicate of 13) beta-methylthiolationofd_duplicateof13__ 26 beta-methylthiolationofd_duplicateof13__ carbamidomethyl C carbamidomethylc_ 3 carbamidomethylc_ carbamylation of K carbamylationofk_ 31 carbamylationofk_ carbamylation of n-term peptide carbamylationofn-termpeptide_ 32 carbamylationofn-termpeptide_ carboxyamidomethylation of D carboxyamidomethylationofd_ 29 carboxyamidomethylationofd_ carboxyamidomethylation of E carboxyamidomethylationofe_ 30 carboxyamidomethylationofe_ carboxyamidomethylation of H carboxyamidomethylationofh_ 28 carboxyamidomethylationofh_ carboxyamidomethylation of K carboxyamidomethylationofk_ 27 carboxyamidomethylationofk_ carboxykynurenin of W carboxykynureninofw_ 165 carboxykynureninofw_ carboxymethyl C carboxymethylc_ 2 carboxymethylc_ carboxymethylated selenocysteine carboxymethylatedselenocysteine_ 207 carboxymethylatedselenocysteine_ citrullination of R citrullinationofr_ 33 citrullinationofr_ deamidation of N deamidationofn_ 196 deamidationofn_ deamidation of N and Q deamidationofnandq_ 4 deamidationofnandq_ dehydro of S and T dehydroofsandt_ 164 dehydroofsandt_ di-O18 on peptide n-term di-o18onpeptiden-term_ 88 di-o18onpeptiden-term_ di-iodination of Y di-iodinationofy_ 35 di-iodinationofy_ di-methylation of K di-methylationofk_ 36 di-methylationofk_ di-methylation of R di-methylationofr_ 37 di-methylationofr_ di-methylation of peptide n-term di-methylationofpeptiden-term_ 38 di-methylationofpeptiden-term_ farnesylation of C farnesylationofc_ 42 farnesylationofc_ fluorophenylalanine fluorophenylalanine_ 46 fluorophenylalanine_ formylation of K formylationofk_ 43 formylationofk_ formylation of peptide n-term formylationofpeptiden-term_ 44 formylationofpeptiden-term_ formylation of protein n-term formylationofproteinn-term_ 82 formylationofproteinn-term_ gamma-carboxylation of E gamma-carboxylationofe_ 48 gamma-carboxylationofe_ gammathiopropionylation of K gammathiopropionylationofk_ 40 gammathiopropionylationofk_ gammathiopropionylation of peptide n-term gammathiopropionylationofpeptiden-term_ 41 gammathiopropionylationofpeptiden-term_ geranyl-geranyl geranyl-geranyl_ 49 geranyl-geranyl_ glucuronylation of protein n-term glucuronylationofproteinn-term_ 50 glucuronylationofproteinn-term_ glutathione disulfide glutathionedisulfide_ 51 glutathionedisulfide_ guanidination of K guanidinationofk_ 53 guanidinationofk_ heavy arginine-13C6 heavyarginine-13c6_ 136 heavyarginine-13c6_ heavy arginine-13C6-15N4 heavyarginine-13c6-15n4_ 137 heavyarginine-13c6-15n4_ heavy lysine - 13C6 15N2 heavylysine-13c615n2_ 181 heavylysine-13c615n2_ heavy lysine - 2H4 heavylysine-2h4_ 180 heavylysine-2h4_ heavy lysine-13C6 heavylysine-13c6_ 138 heavylysine-13c6_ homoserine homoserine_ 56 homoserine_ homoserine lactone homoserinelactone_ 57 homoserinelactone_ hydroxylation of Y hydroxylationofy_ 64 hydroxylationofy_ hydroxylation of D hydroxylationofd_ 59 hydroxylationofd_ hydroxylation of F hydroxylationoff_ 63 hydroxylationoff_ hydroxylation of K hydroxylationofk_ 60 hydroxylationofk_ hydroxylation of N hydroxylationofn_ 61 hydroxylationofn_ hydroxylation of P hydroxylationofp_ 62 hydroxylationofp_ iTRAQ114 on K itraq114onk_ 168 itraq114onk_ iTRAQ114 on Y itraq114ony_ 169 itraq114ony_ iTRAQ114 on nterm itraq114onnterm_ 167 itraq114onnterm_ iTRAQ115 on K itraq115onk_ 171 itraq115onk_ iTRAQ115 on Y itraq115ony_ 172 itraq115ony_ iTRAQ115 on nterm itraq115onnterm_ 170 itraq115onnterm_ iTRAQ116 on K itraq116onk_ 174 itraq116onk_ iTRAQ116 on Y itraq116ony_ 175 itraq116ony_ iTRAQ116 on nterm itraq116onnterm_ 173 itraq116onnterm_ iTRAQ117 on K itraq117onk_ 177 itraq117onk_ iTRAQ117 on Y itraq117ony_ 178 itraq117ony_ iTRAQ117 on nterm itraq117onnterm_ 176 itraq117onnterm_ iTRAQ8plex itraq8plex_ 204 itraq8plex_ iTRAQ8plex itraq8plex_ 205 itraq8plex_ iTRAQ8plex itraq8plex_ 203 itraq8plex_ iTRAQ8plex itraq8plex_ 201 itraq8plex_ iTRAQ8plex itraq8plex_ 202 itraq8plex_ iTRAQ8plex itraq8plex_ 200 itraq8plex_ iodination of Y iodinationofy_ 65 iodinationofy_ lipoyl K lipoylk_ 67 lipoylk_ methyl C methylc_ 73 methylc_ methyl H methylh_ 74 methylh_ methyl N methyln_ 75 methyln_ methyl R methylr_ 77 methylr_ methyl ester of D methylesterofd_ 69 methylesterofd_ methyl ester of E (duplicate of 17) methylesterofe_duplicateof17__ 70 methylesterofe_duplicateof17__ methyl ester of S methylesterofs_ 71 methylesterofs_ methyl ester of Y methylesterofy_ 72 methylesterofy_ methyl ester of peptide c-term (duplicate of 18) methylesterofpeptidec-term_duplicateof18__ 68 methylesterofpeptidec-term_duplicateof18__ methylation of D methylationofd_ 16 methylationofd_ methylation of E methylationofe_ 17 methylationofe_ methylation of K methylationofk_ 0 methylationofk_ methylation of Q methylationofq_ 14 methylationofq_ methylation of peptide c-term methylationofpeptidec-term_ 18 methylationofpeptidec-term_ methylation of peptide n-term methylationofpeptiden-term_ 76 methylationofpeptiden-term_ methylation of protein n-term methylationofproteinn-term_ 11 methylationofproteinn-term_ myristoleylation of G myristoleylationofg_ 78 myristoleylationofg_ myristoyl-4H of G myristoyl-4hofg_ 79 myristoyl-4hofg_ myristoylation of K myristoylationofk_ 81 myristoylationofk_ myristoylation of peptide n-term G myristoylationofpeptiden-termg_ 80 myristoylationofpeptiden-termg_ n-acyl diglyceride cysteine n-acyldiglyceridecysteine_ 118 n-acyldiglyceridecysteine_ n-formyl met addition n-formylmetaddition_ 22 n-formylmetaddition_ oxidation of C oxidationofc_ 193 oxidationofc_ oxidation of C to cysteic acid oxidationofctocysteicacid_ 34 oxidationofctocysteicacid_ oxidation of C to sulfinic acid oxidationofctosulfinicacid_ 162 oxidationofctosulfinicacid_ oxidation of F to dihydroxyphenylalanine oxidationofftodihydroxyphenylalanine_ 39 oxidationofftodihydroxyphenylalanine_ oxidation of H oxidationofh_ 89 oxidationofh_ oxidation of H to D oxidationofhtod_ 55 oxidationofhtod_ oxidation of H to N oxidationofhton_ 54 oxidationofhton_ oxidation of M oxidationofm_ 1 oxidationofm_ oxidation of P to pyroglutamic acid oxidationofptopyroglutamicacid_ 111 oxidationofptopyroglutamicacid_ oxidation of W oxidationofw_ 90 oxidationofw_ oxidation of W to formylkynurenin oxidationofwtoformylkynurenin_ 45 oxidationofwtoformylkynurenin_ oxidation of W to hydroxykynurenin oxidationofwtohydroxykynurenin_ 58 oxidationofwtohydroxykynurenin_ oxidation of W to kynurenin oxidationofwtokynurenin_ 66 oxidationofwtokynurenin_ oxidation of W to nitro oxidationofwtonitro_ 85 oxidationofwtonitro_ oxidation of Y (duplicate of 64) oxidationofy_duplicateof64__ 194 oxidationofy_duplicateof64__ oxidation of Y to nitro oxidationofytonitro_ 86 oxidationofytonitro_ palmitoleyl of C palmitoleylofc_ 187 palmitoleylofc_ palmitoleyl of S palmitoleylofs_ 186 palmitoleylofs_ palmitoleyl of T palmitoleyloft_ 188 palmitoleyloft_ palmitoylation of C palmitoylationofc_ 92 palmitoylationofc_ palmitoylation of K palmitoylationofk_ 93 palmitoylationofk_ palmitoylation of S palmitoylationofs_ 94 palmitoylationofs_ palmitoylation of T palmitoylationoft_ 95 palmitoylationoft_ phosphopantetheine S phosphopantetheines_ 91 phosphopantetheines_ phosphorylation of H phosphorylationofh_ 192 phosphorylationofh_ phosphorylation of S phosphorylationofs_ 6 phosphorylationofs_ phosphorylation of S with ETD loss phosphorylationofswithetdloss_ 134 phosphorylationofswithetdloss_ phosphorylation of S with prompt loss phosphorylationofswithpromptloss_ 96 phosphorylationofswithpromptloss_ phosphorylation of T phosphorylationoft_ 7 phosphorylationoft_ phosphorylation of T with ETD loss phosphorylationoftwithetdloss_ 135 phosphorylationoftwithetdloss_ phosphorylation of T with prompt loss phosphorylationoftwithpromptloss_ 97 phosphorylationoftwithpromptloss_ phosphorylation of Y phosphorylationofy_ 8 phosphorylationofy_ phosphorylation with neutral loss on C phosphorylationwithneutrallossonc_ 99 phosphorylationwithneutrallossonc_ phosphorylation with neutral loss on D phosphorylationwithneutrallossond_ 100 phosphorylationwithneutrallossond_ phosphorylation with neutral loss on H phosphorylationwithneutrallossonh_ 101 phosphorylationwithneutrallossonh_ phosphorylation with neutral loss on S phosphorylationwithneutrallossons_ 132 phosphorylationwithneutrallossons_ phosphorylation with neutral loss on T phosphorylationwithneutrallossont_ 133 phosphorylationwithneutrallossont_ phosphorylation with prompt loss on Y phosphorylationwithpromptlossony_ 98 phosphorylationwithpromptlossony_ propionamide C propionamidec_ 5 propionamidec_ propionyl heavy K propionylheavyk_ 104 propionylheavyk_ propionyl heavy peptide n-term propionylheavypeptiden-term_ 105 propionylheavypeptiden-term_ propionyl light K propionyllightk_ 102 propionyllightk_ propionyl light on peptide n-term propionyllightonpeptiden-term_ 103 propionyllightonpeptiden-term_ pyridyl K pyridylk_ 106 pyridylk_ pyridyl peptide n-term pyridylpeptiden-term_ 107 pyridylpeptiden-term_ pyro-cmC pyro-cmc_ 108 pyro-cmc_ pyro-glu from n-term E pyro-glufromn-terme_ 109 pyro-glufromn-terme_ pyro-glu from n-term Q pyro-glufromn-termq_ 110 pyro-glufromn-termq_ s-pyridylethylation of C s-pyridylethylationofc_ 112 s-pyridylethylationofc_ selenocysteine selenocysteine_ 206 selenocysteine_ sulfation of Y sulfationofy_ 114 sulfationofy_ sulphone of M sulphoneofm_ 115 sulphoneofm_ sumoylation of K sumoylationofk_ 166 sumoylationofk_ tri-deuteromethylation of D tri-deuteromethylationofd_ 19 tri-deuteromethylationofd_ tri-deuteromethylation of E tri-deuteromethylationofe_ 20 tri-deuteromethylationofe_ tri-deuteromethylation of peptide c-term tri-deuteromethylationofpeptidec-term_ 21 tri-deuteromethylationofpeptidec-term_ tri-iodination of Y tri-iodinationofy_ 116 tri-iodinationofy_ tri-methylation of K tri-methylationofk_ 15 tri-methylationofk_ tri-methylation of R tri-methylationofr_ 117 tri-methylationofr_ tri-methylation of protein n-term tri-methylationofproteinn-term_ 12 tri-methylationofproteinn-term_ trideuteration of L (SILAC) trideuterationofl_silac__ 197 trideuterationofl_silac__ ubiquitinylation residue ubiquitinylationresidue_ 52 ubiquitinylationresidue_