comparison tool_dependencies.xml @ 0:45ee9e65471f draft default tip

Uploaded

0:45ee9e65471f

<?xml version="1.0"?>
<tool_dependency>
    <package name="peptide_shaker" version="0.31.4">
    <install version="1.0">
        <actions>            
            <action type="download_by_url">http://genesis.ugent.be/maven2/eu/isas/peptideshaker/PeptideShaker/0.31.4/PeptideShaker-0.31.4.zip</action>
            <action type="shell_command">chmod -R o+w resources</action>
            <action type="move_directory_files">
                <source_directory>.</source_directory>
                <destination_directory>$INSTALL_DIR/</destination_directory>
            </action>
            <action type="set_environment">
                <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
                <environment_variable name="PEPTIDESHAKER_ROOT_PATH" action="set_to">$INSTALL_DIR</environment_variable>
                <environment_variable name="PEPTIDESHAKER_JAR_PATH" action="set_to">$INSTALL_DIR/PeptideShaker-0.31.4.jar</environment_variable>
            </action>
        </actions>
    </install>
    <readme>
        Install Galaxy package application for PeptideShaker 0.31.4
        http://peptide-shaker.googlecode.com 
    </readme>
  </package>
</tool_dependency>