# HG changeset patch
# User iracooke
# Date 1433806965 14400
# Node ID 9a4d33da1cce26ffb6748bf9c7303acfc06051e7

planemo upload commit 04b529c9366e6b77f45bfaa44c1a7fac5772f5b9

diff -r 000000000000 -r 9a4d33da1cce tool_dependencies.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Mon Jun 08 19:42:45 2015 -0400
@@ -0,0 +1,23 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="peptide_shaker" version="0.40">
+    <install version="1.0">
+        <actions>
+            <action type="download_by_url">http://genesis.ugent.be/maven2/eu/isas/peptideshaker/PeptideShaker/0.40.0/PeptideShaker-0.40.0.zip</action>
+            <action type="move_directory_files">
+                <source_directory>.</source_directory>
+                <destination_directory>$INSTALL_DIR/</destination_directory>
+            </action>
+            <action type="set_environment">
+                <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
+                <environment_variable name="PEPTIDESHAKER_ROOT_PATH" action="set_to">$INSTALL_DIR</environment_variable>
+                <environment_variable name="PEPTIDESHAKER_JAR_PATH" action="set_to">$INSTALL_DIR/PeptideShaker-0.40.0.jar</environment_variable>
+            </action>
+        </actions>
+    </install>
+    <readme>
+        Install Galaxy package application for PeptideShaker 0.40
+        http://peptide-shaker.googlecode.com 
+    </readme>
+  </package>
+</tool_dependency>