Mercurial > repos > iracooke > protk
comparison tool-data/omssa_mods.loc.sample @ 0:a929e27eb203 draft
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| author | iracooke |
|---|---|
| date | Thu, 21 Jun 2012 22:30:48 -0400 |
| parents | |
| children |
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| -1:000000000000 | 0:a929e27eb203 |
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| 1 #This file lists the names of chemical modifications accepted by OMMSA | |
| 2 # | |
| 3 # | |
| 4 2-amino-3-oxo-butanoic acid T 2-amino-3-oxo-butanoicacidt_ 23 2-amino-3-oxo-butanoicacidt_ | |
| 5 Asparagine HexNAc asparaginehexnac_ 182 asparaginehexnac_ | |
| 6 Asparagine dHexHexNAc asparaginedhexhexnac_ 183 asparaginedhexhexnac_ | |
| 7 CAMthiopropanoyl K camthiopropanoylk_ 131 camthiopropanoylk_ | |
| 8 CHD2-di-methylation of K chd2-di-methylationofk_ 189 chd2-di-methylationofk_ | |
| 9 CHD2-di-methylation of peptide n-term chd2-di-methylationofpeptiden-term_ 190 chd2-di-methylationofpeptiden-term_ | |
| 10 ICAT heavy icatheavy_ 130 icatheavy_ | |
| 11 ICAT light icatlight_ 129 icatlight_ | |
| 12 M cleavage from protein n-term mcleavagefromproteinn-term_ 9 mcleavagefromproteinn-term_ | |
| 13 MMTS on C mmtsonc_ 179 mmtsonc_ | |
| 14 Maleimide-PEO2-Biotin of C maleimide-peo2-biotinofc_ 191 maleimide-peo2-biotinofc_ | |
| 15 NEM C nemc_ 83 nemc_ | |
| 16 NIPCAM nipcam_ 84 nipcam_ | |
| 17 O18 on peptide n-term o18onpeptiden-term_ 87 o18onpeptiden-term_ | |
| 18 PNGasF in O18 water pngasfino18water_ 139 pngasfino18water_ | |
| 19 SeMet semet_ 113 semet_ | |
| 20 Serine HexNAc serinehexnac_ 184 serinehexnac_ | |
| 21 TMT 6-plex on K tmt6-plexonk_ 198 tmt6-plexonk_ | |
| 22 TMT 6-plex on n-term peptide tmt6-plexonn-termpeptide_ 199 tmt6-plexonn-termpeptide_ | |
| 23 Threonine HexNAc threoninehexnac_ 185 threoninehexnac_ | |
| 24 Uniblue A on K uniblueaonk_ 195 uniblueaonk_ | |
| 25 acetylation of K acetylationofk_ 24 acetylationofk_ | |
| 26 acetylation of protein n-term acetylationofproteinn-term_ 10 acetylationofproteinn-term_ | |
| 27 amidation of peptide c-term amidationofpeptidec-term_ 25 amidationofpeptidec-term_ | |
| 28 arginine to ornithine argininetoornithine_ 163 argininetoornithine_ | |
| 29 beta elimination of S betaeliminationofs_ 140 betaeliminationofs_ | |
| 30 beta elimination of T betaeliminationoft_ 141 betaeliminationoft_ | |
| 31 beta methythiolation of D betamethythiolationofd_ 13 betamethythiolationofd_ | |
| 32 beta-carboxylation of D beta-carboxylationofd_ 47 beta-carboxylationofd_ | |
| 33 beta-methylthiolation of D (duplicate of 13) beta-methylthiolationofd_duplicateof13__ 26 beta-methylthiolationofd_duplicateof13__ | |
| 34 carbamidomethyl C carbamidomethylc_ 3 carbamidomethylc_ | |
| 35 carbamylation of K carbamylationofk_ 31 carbamylationofk_ | |
| 36 carbamylation of n-term peptide carbamylationofn-termpeptide_ 32 carbamylationofn-termpeptide_ | |
| 37 carboxyamidomethylation of D carboxyamidomethylationofd_ 29 carboxyamidomethylationofd_ | |
| 38 carboxyamidomethylation of E carboxyamidomethylationofe_ 30 carboxyamidomethylationofe_ | |
| 39 carboxyamidomethylation of H carboxyamidomethylationofh_ 28 carboxyamidomethylationofh_ | |
| 40 carboxyamidomethylation of K carboxyamidomethylationofk_ 27 carboxyamidomethylationofk_ | |
| 41 carboxykynurenin of W carboxykynureninofw_ 165 carboxykynureninofw_ | |
| 42 carboxymethyl C carboxymethylc_ 2 carboxymethylc_ | |
| 43 carboxymethylated selenocysteine carboxymethylatedselenocysteine_ 207 carboxymethylatedselenocysteine_ | |
| 44 citrullination of R citrullinationofr_ 33 citrullinationofr_ | |
| 45 deamidation of N deamidationofn_ 196 deamidationofn_ | |
| 46 deamidation of N and Q deamidationofnandq_ 4 deamidationofnandq_ | |
| 47 dehydro of S and T dehydroofsandt_ 164 dehydroofsandt_ | |
| 48 di-O18 on peptide n-term di-o18onpeptiden-term_ 88 di-o18onpeptiden-term_ | |
| 49 di-iodination of Y di-iodinationofy_ 35 di-iodinationofy_ | |
| 50 di-methylation of K di-methylationofk_ 36 di-methylationofk_ | |
| 51 di-methylation of R di-methylationofr_ 37 di-methylationofr_ | |
| 52 di-methylation of peptide n-term di-methylationofpeptiden-term_ 38 di-methylationofpeptiden-term_ | |
| 53 farnesylation of C farnesylationofc_ 42 farnesylationofc_ | |
| 54 fluorophenylalanine fluorophenylalanine_ 46 fluorophenylalanine_ | |
| 55 formylation of K formylationofk_ 43 formylationofk_ | |
| 56 formylation of peptide n-term formylationofpeptiden-term_ 44 formylationofpeptiden-term_ | |
| 57 formylation of protein n-term formylationofproteinn-term_ 82 formylationofproteinn-term_ | |
| 58 gamma-carboxylation of E gamma-carboxylationofe_ 48 gamma-carboxylationofe_ | |
| 59 gammathiopropionylation of K gammathiopropionylationofk_ 40 gammathiopropionylationofk_ | |
| 60 gammathiopropionylation of peptide n-term gammathiopropionylationofpeptiden-term_ 41 gammathiopropionylationofpeptiden-term_ | |
| 61 geranyl-geranyl geranyl-geranyl_ 49 geranyl-geranyl_ | |
| 62 glucuronylation of protein n-term glucuronylationofproteinn-term_ 50 glucuronylationofproteinn-term_ | |
| 63 glutathione disulfide glutathionedisulfide_ 51 glutathionedisulfide_ | |
| 64 guanidination of K guanidinationofk_ 53 guanidinationofk_ | |
| 65 heavy arginine-13C6 heavyarginine-13c6_ 136 heavyarginine-13c6_ | |
| 66 heavy arginine-13C6-15N4 heavyarginine-13c6-15n4_ 137 heavyarginine-13c6-15n4_ | |
| 67 heavy lysine - 13C6 15N2 heavylysine-13c615n2_ 181 heavylysine-13c615n2_ | |
| 68 heavy lysine - 2H4 heavylysine-2h4_ 180 heavylysine-2h4_ | |
| 69 heavy lysine-13C6 heavylysine-13c6_ 138 heavylysine-13c6_ | |
| 70 homoserine homoserine_ 56 homoserine_ | |
| 71 homoserine lactone homoserinelactone_ 57 homoserinelactone_ | |
| 72 hydroxylation of Y hydroxylationofy_ 64 hydroxylationofy_ | |
| 73 hydroxylation of D hydroxylationofd_ 59 hydroxylationofd_ | |
| 74 hydroxylation of F hydroxylationoff_ 63 hydroxylationoff_ | |
| 75 hydroxylation of K hydroxylationofk_ 60 hydroxylationofk_ | |
| 76 hydroxylation of N hydroxylationofn_ 61 hydroxylationofn_ | |
| 77 hydroxylation of P hydroxylationofp_ 62 hydroxylationofp_ | |
| 78 iTRAQ114 on K itraq114onk_ 168 itraq114onk_ | |
| 79 iTRAQ114 on Y itraq114ony_ 169 itraq114ony_ | |
| 80 iTRAQ114 on nterm itraq114onnterm_ 167 itraq114onnterm_ | |
| 81 iTRAQ115 on K itraq115onk_ 171 itraq115onk_ | |
| 82 iTRAQ115 on Y itraq115ony_ 172 itraq115ony_ | |
| 83 iTRAQ115 on nterm itraq115onnterm_ 170 itraq115onnterm_ | |
| 84 iTRAQ116 on K itraq116onk_ 174 itraq116onk_ | |
| 85 iTRAQ116 on Y itraq116ony_ 175 itraq116ony_ | |
| 86 iTRAQ116 on nterm itraq116onnterm_ 173 itraq116onnterm_ | |
| 87 iTRAQ117 on K itraq117onk_ 177 itraq117onk_ | |
| 88 iTRAQ117 on Y itraq117ony_ 178 itraq117ony_ | |
| 89 iTRAQ117 on nterm itraq117onnterm_ 176 itraq117onnterm_ | |
| 90 iTRAQ8plex itraq8plex_ 204 itraq8plex_ | |
| 91 iTRAQ8plex itraq8plex_ 205 itraq8plex_ | |
| 92 iTRAQ8plex itraq8plex_ 203 itraq8plex_ | |
| 93 iTRAQ8plex itraq8plex_ 201 itraq8plex_ | |
| 94 iTRAQ8plex itraq8plex_ 202 itraq8plex_ | |
| 95 iTRAQ8plex itraq8plex_ 200 itraq8plex_ | |
| 96 iodination of Y iodinationofy_ 65 iodinationofy_ | |
| 97 lipoyl K lipoylk_ 67 lipoylk_ | |
| 98 methyl C methylc_ 73 methylc_ | |
| 99 methyl H methylh_ 74 methylh_ | |
| 100 methyl N methyln_ 75 methyln_ | |
| 101 methyl R methylr_ 77 methylr_ | |
| 102 methyl ester of D methylesterofd_ 69 methylesterofd_ | |
| 103 methyl ester of E (duplicate of 17) methylesterofe_duplicateof17__ 70 methylesterofe_duplicateof17__ | |
| 104 methyl ester of S methylesterofs_ 71 methylesterofs_ | |
| 105 methyl ester of Y methylesterofy_ 72 methylesterofy_ | |
| 106 methyl ester of peptide c-term (duplicate of 18) methylesterofpeptidec-term_duplicateof18__ 68 methylesterofpeptidec-term_duplicateof18__ | |
| 107 methylation of D methylationofd_ 16 methylationofd_ | |
| 108 methylation of E methylationofe_ 17 methylationofe_ | |
| 109 methylation of K methylationofk_ 0 methylationofk_ | |
| 110 methylation of Q methylationofq_ 14 methylationofq_ | |
| 111 methylation of peptide c-term methylationofpeptidec-term_ 18 methylationofpeptidec-term_ | |
| 112 methylation of peptide n-term methylationofpeptiden-term_ 76 methylationofpeptiden-term_ | |
| 113 methylation of protein n-term methylationofproteinn-term_ 11 methylationofproteinn-term_ | |
| 114 myristoleylation of G myristoleylationofg_ 78 myristoleylationofg_ | |
| 115 myristoyl-4H of G myristoyl-4hofg_ 79 myristoyl-4hofg_ | |
| 116 myristoylation of K myristoylationofk_ 81 myristoylationofk_ | |
| 117 myristoylation of peptide n-term G myristoylationofpeptiden-termg_ 80 myristoylationofpeptiden-termg_ | |
| 118 n-acyl diglyceride cysteine n-acyldiglyceridecysteine_ 118 n-acyldiglyceridecysteine_ | |
| 119 n-formyl met addition n-formylmetaddition_ 22 n-formylmetaddition_ | |
| 120 oxidation of C oxidationofc_ 193 oxidationofc_ | |
| 121 oxidation of C to cysteic acid oxidationofctocysteicacid_ 34 oxidationofctocysteicacid_ | |
| 122 oxidation of C to sulfinic acid oxidationofctosulfinicacid_ 162 oxidationofctosulfinicacid_ | |
| 123 oxidation of F to dihydroxyphenylalanine oxidationofftodihydroxyphenylalanine_ 39 oxidationofftodihydroxyphenylalanine_ | |
| 124 oxidation of H oxidationofh_ 89 oxidationofh_ | |
| 125 oxidation of H to D oxidationofhtod_ 55 oxidationofhtod_ | |
| 126 oxidation of H to N oxidationofhton_ 54 oxidationofhton_ | |
| 127 oxidation of M oxidationofm_ 1 oxidationofm_ | |
| 128 oxidation of P to pyroglutamic acid oxidationofptopyroglutamicacid_ 111 oxidationofptopyroglutamicacid_ | |
| 129 oxidation of W oxidationofw_ 90 oxidationofw_ | |
| 130 oxidation of W to formylkynurenin oxidationofwtoformylkynurenin_ 45 oxidationofwtoformylkynurenin_ | |
| 131 oxidation of W to hydroxykynurenin oxidationofwtohydroxykynurenin_ 58 oxidationofwtohydroxykynurenin_ | |
| 132 oxidation of W to kynurenin oxidationofwtokynurenin_ 66 oxidationofwtokynurenin_ | |
| 133 oxidation of W to nitro oxidationofwtonitro_ 85 oxidationofwtonitro_ | |
| 134 oxidation of Y (duplicate of 64) oxidationofy_duplicateof64__ 194 oxidationofy_duplicateof64__ | |
| 135 oxidation of Y to nitro oxidationofytonitro_ 86 oxidationofytonitro_ | |
| 136 palmitoleyl of C palmitoleylofc_ 187 palmitoleylofc_ | |
| 137 palmitoleyl of S palmitoleylofs_ 186 palmitoleylofs_ | |
| 138 palmitoleyl of T palmitoleyloft_ 188 palmitoleyloft_ | |
| 139 palmitoylation of C palmitoylationofc_ 92 palmitoylationofc_ | |
| 140 palmitoylation of K palmitoylationofk_ 93 palmitoylationofk_ | |
| 141 palmitoylation of S palmitoylationofs_ 94 palmitoylationofs_ | |
| 142 palmitoylation of T palmitoylationoft_ 95 palmitoylationoft_ | |
| 143 phosphopantetheine S phosphopantetheines_ 91 phosphopantetheines_ | |
| 144 phosphorylation of H phosphorylationofh_ 192 phosphorylationofh_ | |
| 145 phosphorylation of S phosphorylationofs_ 6 phosphorylationofs_ | |
| 146 phosphorylation of S with ETD loss phosphorylationofswithetdloss_ 134 phosphorylationofswithetdloss_ | |
| 147 phosphorylation of S with prompt loss phosphorylationofswithpromptloss_ 96 phosphorylationofswithpromptloss_ | |
| 148 phosphorylation of T phosphorylationoft_ 7 phosphorylationoft_ | |
| 149 phosphorylation of T with ETD loss phosphorylationoftwithetdloss_ 135 phosphorylationoftwithetdloss_ | |
| 150 phosphorylation of T with prompt loss phosphorylationoftwithpromptloss_ 97 phosphorylationoftwithpromptloss_ | |
| 151 phosphorylation of Y phosphorylationofy_ 8 phosphorylationofy_ | |
| 152 phosphorylation with neutral loss on C phosphorylationwithneutrallossonc_ 99 phosphorylationwithneutrallossonc_ | |
| 153 phosphorylation with neutral loss on D phosphorylationwithneutrallossond_ 100 phosphorylationwithneutrallossond_ | |
| 154 phosphorylation with neutral loss on H phosphorylationwithneutrallossonh_ 101 phosphorylationwithneutrallossonh_ | |
| 155 phosphorylation with neutral loss on S phosphorylationwithneutrallossons_ 132 phosphorylationwithneutrallossons_ | |
| 156 phosphorylation with neutral loss on T phosphorylationwithneutrallossont_ 133 phosphorylationwithneutrallossont_ | |
| 157 phosphorylation with prompt loss on Y phosphorylationwithpromptlossony_ 98 phosphorylationwithpromptlossony_ | |
| 158 propionamide C propionamidec_ 5 propionamidec_ | |
| 159 propionyl heavy K propionylheavyk_ 104 propionylheavyk_ | |
| 160 propionyl heavy peptide n-term propionylheavypeptiden-term_ 105 propionylheavypeptiden-term_ | |
| 161 propionyl light K propionyllightk_ 102 propionyllightk_ | |
| 162 propionyl light on peptide n-term propionyllightonpeptiden-term_ 103 propionyllightonpeptiden-term_ | |
| 163 pyridyl K pyridylk_ 106 pyridylk_ | |
| 164 pyridyl peptide n-term pyridylpeptiden-term_ 107 pyridylpeptiden-term_ | |
| 165 pyro-cmC pyro-cmc_ 108 pyro-cmc_ | |
| 166 pyro-glu from n-term E pyro-glufromn-terme_ 109 pyro-glufromn-terme_ | |
| 167 pyro-glu from n-term Q pyro-glufromn-termq_ 110 pyro-glufromn-termq_ | |
| 168 s-pyridylethylation of C s-pyridylethylationofc_ 112 s-pyridylethylationofc_ | |
| 169 selenocysteine selenocysteine_ 206 selenocysteine_ | |
| 170 sulfation of Y sulfationofy_ 114 sulfationofy_ | |
| 171 sulphone of M sulphoneofm_ 115 sulphoneofm_ | |
| 172 sumoylation of K sumoylationofk_ 166 sumoylationofk_ | |
| 173 tri-deuteromethylation of D tri-deuteromethylationofd_ 19 tri-deuteromethylationofd_ | |
| 174 tri-deuteromethylation of E tri-deuteromethylationofe_ 20 tri-deuteromethylationofe_ | |
| 175 tri-deuteromethylation of peptide c-term tri-deuteromethylationofpeptidec-term_ 21 tri-deuteromethylationofpeptidec-term_ | |
| 176 tri-iodination of Y tri-iodinationofy_ 116 tri-iodinationofy_ | |
| 177 tri-methylation of K tri-methylationofk_ 15 tri-methylationofk_ | |
| 178 tri-methylation of R tri-methylationofr_ 117 tri-methylationofr_ | |
| 179 tri-methylation of protein n-term tri-methylationofproteinn-term_ 12 tri-methylationofproteinn-term_ | |
| 180 trideuteration of L (SILAC) trideuterationofl_silac__ 197 trideuterationofl_silac__ | |
| 181 ubiquitinylation residue ubiquitinylationresidue_ 52 ubiquitinylationresidue_ |