changeset 3:255b5b6ec617 draft default tip

Better defaults for omssa
author Ira Cooke <iracooke@gmail.com>
date Mon, 23 Jul 2012 14:48:31 +1000
parents 418f42b34049
children
files omssa.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/omssa.xml	Mon Jul 23 00:20:58 2012 -0400
+++ b/omssa.xml	Mon Jul 23 14:48:31 2012 +1000
@@ -103,7 +103,7 @@
 		</param>
 
 		<param name="fragment_ion_tol" help="Fragment Ion Tolerance in Daltons" type="float" value="0.65" min="0" max="10000" label="Fragment ion tolerance"/>
-		<param name="max_hit_expect" help="Expect values less than this are considered to be hits. Use a large value, eg 10000 when results will be processed downstream with Peptide Prophet" type="float" value="1.0" min="0" max="10000000" label="Maximum Expect value allowed in the hit list"/><!-- -he-->
+		<param name="max_hit_expect" help="Expect values less than this are considered to be hits. Use a large value, eg 10000 when results will be processed downstream with Peptide Prophet" type="float" value="10000.0" min="0" max="10000000" label="Maximum Expect value allowed in the hit list"/><!-- -he-->
 		<param name="intensity_cut_off" help="Peak intensity cut-off as a fraction of maximum peak intensity" type="float" value="0.0005" min="0" max="1" label="Peak intensity cut-off"/><!-- -ci-->