comparison tool_dependencies.xml @ 0:6be01b5359b8

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0:6be01b5359b8

<?xml version="1.0"?>
<tool_dependency>
    <package name="msgfplus" version="20130227">
        <install version="1.0">
            <actions>
                <action type="download_by_url">https://dl.dropbox.com/u/226794/galaxy_protk.tar.gz</action>
                <action type="shell_command">sh install_msgfplus.sh $INSTALL_DIR 1.1.9</action>
                <action type="move_file">
                    <source>install_msgfplus.sh</source>
                    <destination>$INSTALL_DIR</destination>
                </action>
                <action type="set_environment">
                    <environment_variable name="PROTK_MSGFPLUS_ROOT" action="set_to">$INSTALL_DIR</environment_variable>
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
            Installs MSGF+ via the protk installer
        </readme>
    </package>

</tool_dependency>