Mercurial > repos > iracooke > protk_trans_proteomic_pipeline
comparison README @ 2:cedd5e884349
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| author | iracooke |
|---|---|
| date | Tue, 05 Mar 2013 00:14:39 -0500 |
| parents | |
| children | e85a18371516 |
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| 1:f302406a0297 | 2:cedd5e884349 |
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| 1 This package installs the Trans Proteomic Pipeline Commandline Tools | |
| 2 | |
| 3 Installing this package should proceed automatically however for the purpose | |
| 4 of troubleshooting these are the steps it will perform | |
| 5 | |
| 6 1. Download an install script from dropbox | |
| 7 2. Install several perl packages locally (inside the install directory) | |
| 8 3. Download the TPP source code from dropbox | |
| 9 4. Build the TPP | |
| 10 | |
| 11 Intermediate files in this process are stored in ~/.protk/tmp/download and ~/.protk/tmp/build | |
| 12 | |
| 13 Requirements: | |
| 14 This package depends on the galaxy_protk | |
| 15 Please see instructions for that package before installing | |
| 16 | |
| 17 In addition the following packages are required in order to build the TPP | |
| 18 subversion libbz2-dev swig expat libpng12-dev gnuplot libperl-dev build-essential | |
| 19 libgd2-xpm libfuse-dev libcurl4-openssl-dev libxml2-dev libgd2-xpm-dev | |
| 20 |