diff pepxml_to_table.xml @ 8:d19a95abf2e4

Update
author Ira Cooke <iracooke@gmail.com>
date Sun, 09 Jun 2013 08:19:01 -0500
parents 3f0cb90824f1
children
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line diff
--- a/pepxml_to_table.xml	Tue Mar 05 00:28:22 2013 -0500
+++ b/pepxml_to_table.xml	Sun Jun 09 08:19:01 2013 -0500
@@ -1,7 +1,7 @@
 <tool id="pepxml_to_table_1" name="PepXML to Table" version="1.0.1">
 
 	<requirements>
-	    <requirement type="package" version="1.2.0">galaxy_protk</requirement>
+	    <requirement type="package" version="1.2.2">galaxy_protk</requirement>
    </requirements>
 
 
@@ -10,12 +10,12 @@
 
 
 <!-- Note .. the input file is assumed to be the first argument -->
-<command>rvm 1.9.3@protk-1.2.0 do pepxml_to_table.rb $input_file -o $output</command>
+<command>rvm 1.9.3@protk-1.2.2 do pepxml_to_table.rb $input_file -o $output</command>
 
 
 <inputs>
 
-	<param name="input_file" type="data" format="pepxml,peptideprophet_pepxml,interprophet_pepxml"  multiple="false" label="Input File" help="A pepXML file"/>
+	<param name="input_file" type="data" format="pepxml,raw_pepxml,peptideprophet_pepxml,interprophet_pepxml"  multiple="false" label="Input File" help="A pepXML file"/>
 
 </inputs>
 <outputs>