# HG changeset patch
# User iracooke
# Date 1404227801 14400
# Node ID b793fe6286481ca2c772f4625b745d04cc7cb9d1
# Parent  4c66453a168e74ac4e61edadc9baa0fc25606c7d
Uploaded

diff -r 4c66453a168e -r b793fe628648 peptide_prophet.xml
--- a/peptide_prophet.xml	Mon Jun 16 07:17:09 2014 -0400
+++ b/peptide_prophet.xml	Tue Jul 01 11:16:41 2014 -0400
@@ -31,7 +31,7 @@
     <param name="input_file" type="data" format="raw_pepxml" multiple="false" label="Raw Search Results" help="These files will typically be outputs from omssa or xtandem search tools"/>
 
 	<param name="glyco" type="boolean" label="Expect true positives to have a glycocapture motif" truevalue="--glyco" falsevalue=""/>
-	<param name="useicat" type="boolean" label="Use icat information" truevalue="--useicat" falsevalue="--no-useicat"/>
+	<param name="useicat" type="boolean" label="Use icat information" truevalue="--useicat" falsevalue=""/>
 	<param name="phospho" type="boolean" label="Use phospho information" truevalue="--phospho" falsevalue=""/>
 	<param name="usepi" type="boolean" label="Use pI information" truevalue="--usepi" falsevalue=""/>
 	<param name="usert" type="boolean" label="Use hydrophobicity / RT information" truevalue="--usert" falsevalue=""/>