Mercurial > repos > iuc > abricate

comparison test-data/output_mrsa.txt @ 5:f9bf6a8d8547 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/abricate/ commit c272325e121abb0582d2a50759ee04b43f327d4d"
author iuc
date Wed, 11 Sep 2019 23:57:17 -0400
parents 78c75f134c16
children 1bb2ba6d3d96
comparison
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4:78c75f134c16 5:f9bf6a8d8547
1 #FILE SEQUENCE START END GENE COVERAGE COVERAGE_MAP GAPS %COVERAGE %IDENTITY DATABASE ACCESSION PRODUCT 1 #FILE SEQUENCE START END GENE COVERAGE COVERAGE_MAP GAPS %COVERAGE %IDENTITY DATABASE ACCESSION PRODUCT
2 NC_002952.2 40786 41556 aadD_1 1-771/771 =============== 0/0 100.00 99.74 resfinder AF181950 Alternate name; ant(4')-Ia and aadD2 2 MRSA0252.fna gi|49482253|ref|NC_002952.2| 40786 41556 aadD_2 1-771/771 =============== 0/0 100.00 100.00 resfinder M19465_dupe resfinder~~~aadD_2~~~M19465_dupe Alternate name; ant(4')-Ia and aadD2
3 NC_002952.2 44919 46928 mecA_15 1-2010/2010 =============== 0/0 100.00 100.00 resfinder AB505628 mecA_15 3 MRSA0252.fna gi|49482253|ref|NC_002952.2| 44919 46925 mecA_6 1-2007/2007 =============== 0/0 100.00 100.00 resfinder BX571856 resfinder~~~mecA_6~~~BX571856 mecA_6
4 NC_002952.2 55890 56621 erm(A)_1 1-732/732 =============== 0/0 100.00 100.00 resfinder X03216 erm(A)_1 4 MRSA0252.fna gi|49482253|ref|NC_002952.2| 55890 56621 erm(A)_1 1-732/732 =============== 0/0 100.00 100.00 resfinder X03216 resfinder~~~erm(A)_1~~~X03216 erm(A)_1
5 NC_002952.2 56747 57529 spc_1 1-783/783 =============== 0/0 100.00 100.00 resfinder X02588 Alternate name; aad9 ant(9)-Ia 5 MRSA0252.fna gi|49482253|ref|NC_002952.2| 56747 57529 ant(9)-Ia_1 1-783/783 =============== 0/0 100.00 100.00 resfinder X02588 resfinder~~~ant(9)-Ia_1~~~X02588 ant(9)-Ia_1
6 NC_002952.2 1796513 1797244 erm(A)_1 1-732/732 =============== 0/0 100.00 100.00 resfinder X03216 erm(A)_1 6 MRSA0252.fna gi|49482253|ref|NC_002952.2| 1796513 1797244 erm(A)_1 1-732/732 =============== 0/0 100.00 100.00 resfinder X03216 resfinder~~~erm(A)_1~~~X03216 erm(A)_1
7 NC_002952.2 1797370 1798152 spc_1 1-783/783 =============== 0/0 100.00 100.00 resfinder X02588 Alternate name; aad9 ant(9)-Ia 7 MRSA0252.fna gi|49482253|ref|NC_002952.2| 1797370 1798152 ant(9)-Ia_1 1-783/783 =============== 0/0 100.00 100.00 resfinder X02588 resfinder~~~ant(9)-Ia_1~~~X02588 ant(9)-Ia_1
8 NC_002952.2 1913827 1914672 blaZ_36 1-846/846 =============== 0/0 100.00 100.00 resfinder AJ400722 blaZ_36 8 MRSA0252.fna gi|49482253|ref|NC_002952.2| 1913785 1914672 blaZ_78 1-888/888 =============== 0/0 100.00 99.66 resfinder KU607301 resfinder~~~blaZ_78~~~KU607301 blaZ_78
9 NC_002952.2 2488459 2488878 fosD_1 1-420/420 =============== 0/0 100.00 79.05 resfinder KC989517 fosD_1 9 MRSA0252.fna gi|49482253|ref|NC_002952.2| 2488459 2488878 fosD_1 1-420/420 =============== 0/0 100.00 79.05 resfinder KC989517 resfinder~~~fosD_1~~~KC989517 fosD_1