Mercurial > repos > iuc > abyss
changeset 11:7547fcab5d19 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/abyss commit dff6775ae41cbd3da949bbc57c4f79a11cd56ea6
| author | iuc |
|---|---|
| date | Tue, 09 May 2023 10:13:25 +0000 |
| parents | 8f1b150a2487 |
| children | a929ce596a34 |
| files | abyss-pe.xml |
| diffstat | 1 files changed, 6 insertions(+), 6 deletions(-) [+] |
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--- a/abyss-pe.xml Wed Jan 12 17:04:56 2022 +0000 +++ b/abyss-pe.xml Tue May 09 10:13:25 2023 +0000 @@ -1,11 +1,8 @@ <tool id="abyss-pe" name="ABySS" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@"> <description>de novo sequence assembler</description> - <xrefs> - <xref type="bio.tools">abyss</xref> - </xrefs> <macros> - <token name="@TOOL_VERSION@">2.3.4</token> - <token name="@VERSION_SUFFIX@">1</token> + <token name="@TOOL_VERSION@">2.3.6</token> + <token name="@VERSION_SUFFIX@">0</token> <xml name="reads_conditional"> <conditional name="reads"> <param name="reads_selector" type="select" label="Type of paired-end datasets"> @@ -26,6 +23,9 @@ </conditional> </xml> </macros> + <xrefs> + <xref type="bio.tools">abyss</xref> + </xrefs> <requirements> <requirement type="package" version="@TOOL_VERSION@">abyss</requirement> <requirement type="package" version="0.7.17">bwa</requirement> @@ -219,7 +219,7 @@ <data name="scaffolds" format="fasta" label="${tool.name} on ${on_string}: scaffolds" from_work_dir="abyss-scaffolds.fa"> <filter>lib_repeat or mp_repeat</filter> </data> - <data name="long_scaffolds" format="fasta" label="${tool.name} on ${on_string}: scaffolds" from_work_dir="abyss-long-scaffs.fa"> + <data name="long_scaffolds" format="fasta" label="${tool.name} on ${on_string}: long scaffolds" from_work_dir="abyss-long-scaffs.fa"> <filter>long_seqs</filter> </data> <data name="indels" format="fasta" label="${tool.name} on ${on_string}: indels" from_work_dir="abyss-indel.fa" />