comparison core.xml @ 2:7f712eb18230 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ampvis2 commit 09b56ef3e09ad6c5923c88616fea5cbd77d87616

1:de6156c8ef16

Core community plot to investigate how many of the most abundant OTU's comprise
the "core" of groups of samples, their abundances etc.

The Galaxy tool calls the `amp_core
<https://madsalbertsen.github.io/ampvis2/reference/amp_core.html>`_ function
of the ampvis2 package.

This analysis only makes sense without aggregating OTU's to any taxonomic level,
or else it will be biased by taxonomy and only be done on OTU's that have been
classified, which is rarely all.

2:7f712eb18230

Core community plot to investigate how many of the most abundant OTU's comprise
the "core" of groups of samples, their abundances etc.

The Galaxy tool calls the `amp_core
<https://kasperskytte.github.io/ampvis2/reference/amp_core.html>`_ function
of the ampvis2 package.

This analysis only makes sense without aggregating OTU's to any taxonomic level,
or else it will be biased by taxonomy and only be done on OTU's that have been
classified, which is rarely all.