diff subset_samples.xml @ 5:317728cb0f8a draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ampvis2 commit 9ed0c3078be166bd22136771f517ae91a5198ecf

--- a/subset_samples.xml	Sat Mar 16 11:31:10 2024 +0000
+++ b/subset_samples.xml	Fri Aug 16 09:01:42 2024 +0000
@@ -62,6 +62,22 @@
                 </assert_contents>
             </output>
         </test>
+        <!-- test NA values in metadata -->
+        <test expect_num_outputs="2">
+            <param name="data" value="AalborgWWTPs.rds" ftype="ampvis2"/> 
+            <param name="metadata_list" value="AalborgWWTPs-metadata_NA.list"/>
+            <param name="var" value="Plant"/>
+            <param name="vals" value="Aalborg East"/>
+            <output name="ampvis" value="AalborgWWTPs-subset_samples.rds" ftype="ampvis2" compare="sim_size"/>
+            <output name="metadata_list_out" ftype="tabular">
+                <assert_contents>
+                    <has_line line="Plant&#9;Aalborg East&#9;FALSE&#9;character"/>
+                    <not_has_text text="SampleID&#9;NA&#9;TRUE&#9;character"/>
+                    <has_n_lines n="85"/>
+                    <has_n_columns n="4"/>
+                </assert_contents>
+            </output>
+        </test>
         <!-- invert -->
         <test expect_num_outputs="2">
             <param name="data" value="AalborgWWTPs.rds" ftype="ampvis2"/>