Mercurial > repos > iuc > anndata_export

diff export.xml @ 11:e1c3c2f2a834 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/anndata/ commit 656ce7ff596a8870b77848469e85b406c7bd9344
author iuc
date Sun, 12 Nov 2023 16:43:28 +0000
parents 0cb889db0910
children cfaf5a405371
line wrap: on
line diff
--- a/export.xml	Wed Jun 22 07:22:32 2022 +0000
+++ b/export.xml	Sun Nov 12 16:43:28 2023 +0000
@@ -16,7 +16,7 @@
         <configfile name="script_file"><![CDATA[
 @CMD_imports@
 #if $hd5_format.filetype == 'anndata':
-adata = ad.read('$hd5_format.input')
+adata = ad.read_h5ad('$hd5_format.input')
     #if $hd5_format.output_format == 'loom':
 adata.write_loom('anndata.loom')
     #else if $hd5_format.output_format == 'tabular':