Mercurial > repos > iuc > anndata_inspect
comparison inspect.xml @ 4:70f5f1fee692 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/anndata/ commit 41e70af176ea64ef0bd45a6e980e21bdba80e739"
author | iuc |
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date | Sat, 18 Jan 2020 03:37:23 -0500 |
parents | 05304c5c195d |
children | 688357ad5e61 |
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3:286a24ac079c | 4:70f5f1fee692 |
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17 pd.options.display.precision = 15 | 17 pd.options.display.precision = 15 |
18 | 18 |
19 adata = ad.read('$input') | 19 adata = ad.read('$input') |
20 | 20 |
21 #if $inspect.info == 'general' | 21 #if $inspect.info == 'general' |
22 with open('$general', 'w') as f: | 22 with open('$general', 'w', encoding="utf-8") as f: |
23 print(adata, file=f) | 23 print(adata, file=f) |
24 | 24 |
25 #else if $inspect.info == 'X' | 25 #else if $inspect.info == 'X' |
26 adata.to_df().to_csv('$X', sep='\t') | 26 adata.to_df().to_csv('$X', sep='\t') |
27 | 27 |