Mercurial > repos > iuc > anndata_inspect
comparison inspect.xml @ 12:0bf7fddf90c7 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/anndata/ commit 67b3808b56df343798263ff0c905df8cb789edfa
author | iuc |
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date | Sat, 14 Sep 2024 19:58:48 +0000 |
parents | 6f0d0c784f09 |
children |
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11:6f0d0c784f09 | 12:0bf7fddf90c7 |
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1 <tool id="anndata_inspect" name="Inspect AnnData" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@"> | 1 <tool id="anndata_inspect" name="Inspect AnnData" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@"> |
2 <description>object</description> | 2 <description>object</description> |
3 <macros> | 3 <macros> |
4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
5 </macros> | 5 </macros> |
6 <expand macro="requirements"/> | 6 <expand macro="requirements"/> |
281 <param name="info" value="uns"/> | 281 <param name="info" value="uns"/> |
282 <param name="uns_info" value="neighbors"/> | 282 <param name="uns_info" value="neighbors"/> |
283 </conditional> | 283 </conditional> |
284 <output name="uns_neighbors_connectivities" ftype="mtx"> | 284 <output name="uns_neighbors_connectivities" ftype="mtx"> |
285 <assert_contents> | 285 <assert_contents> |
286 <has_text_matching expression="100 100 1248" /> | 286 <has_text_matching expression="100 100 2496" /> |
287 <has_text_matching expression="4.880" /> | 287 <has_text_matching expression="4.880" /> |
288 </assert_contents> | 288 </assert_contents> |
289 </output> | 289 </output> |
290 <output name="uns_neighbors_distances" ftype="mtx"> | 290 <output name="uns_neighbors_distances" ftype="mtx"> |
291 <assert_contents> | 291 <assert_contents> |
303 <param name="uns_info" value="paga"/> | 303 <param name="uns_info" value="paga"/> |
304 </conditional> | 304 </conditional> |
305 <output name="uns_paga_connectivities" ftype="mtx"> | 305 <output name="uns_paga_connectivities" ftype="mtx"> |
306 <assert_contents> | 306 <assert_contents> |
307 <has_text_matching expression="16 16 97" /> | 307 <has_text_matching expression="16 16 97" /> |
308 <has_text_matching expression="1.000" /> | 308 <has_text_matching expression="2 1 1" /> |
309 <has_text_matching expression="8.839" /> | 309 <has_text_matching expression="8.839" /> |
310 </assert_contents> | 310 </assert_contents> |
311 </output> | 311 </output> |
312 <output name="uns_paga_connectivities_tree" ftype="mtx"> | 312 <output name="uns_paga_connectivities_tree" ftype="mtx"> |
313 <assert_contents> | 313 <assert_contents> |
314 <has_text_matching expression="16 16 15" /> | 314 <has_text_matching expression="16 16 15" /> |
315 <has_text_matching expression="1.000" /> | 315 <has_text_matching expression="1 2 1" /> |
316 </assert_contents> | 316 </assert_contents> |
317 </output> | 317 </output> |
318 </test> | 318 </test> |
319 <test expect_num_outputs="2"> | 319 <test expect_num_outputs="2"> |
320 <!-- test 9: uns, pca --> | 320 <!-- test 9: uns, pca --> |