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comparison annotateMyIDs.xml @ 4:38eedf3cc3c9 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/annotatemyids commit ec1ff890b79f39031a25040611363ef3de1bc5c2
author iuc
date Mon, 28 Jan 2019 18:17:05 -0500
parents 1a125daea0d8
children b467a89be0c6
comparison
equal deleted inserted replaced
3:1a125daea0d8 4:38eedf3cc3c9
1 <tool id="annotatemyids" name="annotateMyIDs" version="3.5.0.1"> 1 <tool id="annotatemyids" name="annotateMyIDs" version="3.6.0">
2 <description>annotate a generic set of identifiers</description> 2 <description>annotate a generic set of identifiers</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="3.5.0">bioconductor-org.hs.eg.db</requirement> 4 <requirement type="package" version="3.6.0">bioconductor-org.hs.eg.db</requirement>
5 <requirement type="package" version="3.5.0">bioconductor-org.mm.eg.db</requirement> 5 <requirement type="package" version="3.6.0">bioconductor-org.mm.eg.db</requirement>
6 <requirement type="package" version="3.5.0">bioconductor-org.dm.eg.db</requirement> 6 <requirement type="package" version="3.6.0">bioconductor-org.dm.eg.db</requirement>
7 <requirement type="package" version="3.5.0">bioconductor-org.dr.eg.db</requirement> 7 <requirement type="package" version="3.6.0">bioconductor-org.dr.eg.db</requirement>
8 </requirements> 8 </requirements>
9 <version_command><![CDATA[ 9 <version_command><![CDATA[
10 echo $(R --version | grep version | grep -v GNU)", org.Hs.eg.db version" $(R --vanilla --slave -e "library(org.Hs.eg.db); cat(sessionInfo()\$otherPkgs\$org.Hs.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", org.Dr.eg.db version" $(R --vanilla --slave -e "library(org.Dr.eg.db); cat(sessionInfo()\$otherPkgs\$org.Dr.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", org.Dm.eg.db version" $(R --vanilla --slave -e "library(org.Dm.eg.db); cat(sessionInfo()\$otherPkgs\$org.Dm.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", org.Mm.eg.db version" $(R --vanilla --slave -e "library(org.Mm.eg.db); cat(sessionInfo()\$otherPkgs\$org.Mm.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ") 10 echo $(R --version | grep version | grep -v GNU)", org.Hs.eg.db version" $(R --vanilla --slave -e "library(org.Hs.eg.db); cat(sessionInfo()\$otherPkgs\$org.Hs.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", org.Dr.eg.db version" $(R --vanilla --slave -e "library(org.Dr.eg.db); cat(sessionInfo()\$otherPkgs\$org.Dr.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", org.Dm.eg.db version" $(R --vanilla --slave -e "library(org.Dm.eg.db); cat(sessionInfo()\$otherPkgs\$org.Dm.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", org.Mm.eg.db version" $(R --vanilla --slave -e "library(org.Mm.eg.db); cat(sessionInfo()\$otherPkgs\$org.Mm.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ")
11 ]]></version_command> 11 ]]></version_command>
12 <command detect_errors="exit_code"><![CDATA[ 12 <command detect_errors="exit_code"><![CDATA[