Mercurial > repos > iuc > annotatemyids
changeset 8:b5d8e5475247 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/annotatemyids commit bfab2e2b811849e2c9159e4d14b47a215e4bf990"
| author | iuc |
|---|---|
| date | Fri, 12 Jun 2020 15:06:01 -0400 |
| parents | 1aae04680c4b |
| children | 44018dd6b447 |
| files | annotateMyIDs.xml |
| diffstat | 1 files changed, 1 insertions(+), 3 deletions(-) [+] |
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--- a/annotateMyIDs.xml Fri Jun 21 04:03:49 2019 -0400 +++ b/annotateMyIDs.xml Fri Jun 12 15:06:01 2020 -0400 @@ -1,4 +1,4 @@ -<tool id="annotatemyids" name="annotateMyIDs" version="3.7.0+galaxy1"> +<tool id="annotatemyids" name="annotateMyIDs" version="3.7.0+galaxy2"> <description>annotate a generic set of identifiers</description> <requirements> <requirement type="package" version="3.7.0">bioconductor-org.hs.eg.db</requirement> @@ -88,7 +88,6 @@ </param> <param name="output_cols" type="select" multiple="True" display="checkboxes" label="Output columns" help="Choose the columns you want in the output table. Note that selecting some columns such as GO or KEGG could make the table very large as some genes may be associated with many terms. Default: ENSEMBL, ENTREZID, SYMBOL, GENENAME"> <option value="ALIAS">ALIAS</option> - <option value="DESCRIPTION">DESCRIPTION</option> <option value="ENSEMBL" selected="True">ENSEMBL</option> <option value="ENTREZID" selected="True">ENTREZID</option> <option value="EVIDENCE">EVIDENCE</option> @@ -225,7 +224,6 @@ Columns available for output include many of the ID columns already described under Inputs above and also: * **ALIAS**: Commonly used gene symbols - * **DESCRIPTION**: The description of the associated gene * **EVIDENCE**: Evidence codes for GO associations with a gene of interest * **GENENAME**: The full gene name * **ONTOLOGY**: For GO Identifiers, which Gene Ontology (BP, CC, or MF)