Mercurial > repos > iuc > argnorm
view test-data/deeparg_hamronize.tsv @ 0:bae2bc0f1b66 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/argnorm commit cc4c7a0c31ae4bed0c1f0955f3aa72ccdec3b132
| author | iuc |
|---|---|
| date | Wed, 28 Aug 2024 20:27:17 +0000 |
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input_file_name gene_symbol gene_name reference_database_name reference_database_version reference_accession analysis_software_name analysis_software_version genetic_variation_type antimicrobial_agent coverage_percentage coverage_depth coverage_ratio drug_class input_gene_length input_gene_start input_gene_stop input_protein_length input_protein_start input_protein_stop input_sequence_id nucleotide_mutation nucleotide_mutation_interpretation predicted_phenotype predicted_phenotype_confidence_level amino_acid_mutation amino_acid_mutation_interpretation reference_gene_length reference_gene_start reference_gene_stop reference_protein_length reference_protein_start reference_protein_stop resistance_mechanism strand_orientation sequence_identity HSM7J4M8 TETQ ZP_04557016|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 ZP_04557016 deeparg 1.0.2 gene_presence_detected tetracycline 191 223 CAVL1ANXX170419:8:1211:20929:16342/1 100.0 HSM7J4M8 TETQ BAD46890|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 BAD46890 deeparg 1.0.2 gene_presence_detected tetracycline 274 306 CAVL1ANXX170419:8:1211:20929:16342/2 100.0 HSM7J4M8 UGD AAC75089.1|FEATURES|ugd|peptide|ugd deeparg_db 1 AAC75089.1 deeparg 1.0.2 gene_presence_detected peptide 242 274 CAW05ANXX170413:3:1311:9080:27889/2 87.9 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 452 484 CAVL1ANXX170419:7:1112:17911:9537/1 87.9 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 428 471 CAW05ANXX170413:3:2313:9964:68847/1 81.8 HSM7J4M8 TETQ BAD46890|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 BAD46890 deeparg 1.0.2 gene_presence_detected tetracycline 245 277 CAW05ANXX170413:4:2211:15535:39005/1 100.0 HSM7J4M8 TETQ BAD46890|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 BAD46890 deeparg 1.0.2 gene_presence_detected tetracycline 125 156 CAW05ANXX170413:3:1315:16625:39188/1 100.0 HSM7J4M8 CLASS_A P30898|FEATURES|class_A|beta-lactam|class_A deeparg_db 1 P30898 deeparg 1.0.2 gene_presence_detected beta-lactam 168 214 CAW05ANXX170413:4:2110:17870:97415/1 100.0 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 1034 1066 CAVL1ANXX170419:7:2114:1131:86489/1 84.8 HSM7J4M8 TETW CAO78565|FEATURES|tetW|tetracycline|tetW deeparg_db 1 CAO78565 deeparg 1.0.2 gene_presence_detected tetracycline 395 435 CAW05ANXX170413:2:2115:3176:4503/1 100.0 HSM7J4M8 TETW AAL09826|FEATURES|tetW|tetracycline|tetW deeparg_db 1 AAL09826 deeparg 1.0.2 gene_presence_detected tetracycline 265 324 CAVL1ANXX170419:8:1111:1611:100037/1 91.7 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 448 480 CAVL1ANXX170419:7:1301:9203:5016/1 87.9 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 1036 1094 CAW05ANXX170413:4:2308:19209:54439/1 83.1 HSM7J4M8 TETW gi:168258996:gb:ACA23181.1:|FEATURES|tetW|tetracycline|tetW deeparg_db 1 gi:168258996:gb:ACA23181.1: deeparg 1.0.2 gene_presence_detected tetracycline 528 560 CAW05ANXX170413:2:2204:11751:81368/2 100.0 HSM7J4M8 TETW gi:168258996:gb:ACA23181.1:|FEATURES|tetW|tetracycline|tetW deeparg_db 1 gi:168258996:gb:ACA23181.1: deeparg 1.0.2 gene_presence_detected tetracycline 558 590 CAW05ANXX170413:2:2204:11751:81368/1 100.0 HSM7J4M8 DFRF AAD01868.1|FEATURES|dfrF|diaminopyrimidine|dfrF deeparg_db 1 AAD01868.1 deeparg 1.0.2 gene_presence_detected diaminopyrimidine 1 45 CAW05ANXX170413:4:2304:5201:21397/1 100.0 HSM7J4M8 EFRB CDO61516.1|FEATURES|efrB|multidrug|efrB deeparg_db 1 CDO61516.1 deeparg 1.0.2 gene_presence_detected multidrug 324 362 CAW05ANXX170413:4:2108:11625:97887/1 84.6 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 438 467 CAVL1ANXX170419:8:1216:14948:70047/1 90.0 HSM7J4M8 TETW gi:168258996:gb:ACA23181.1:|FEATURES|tetW|tetracycline|tetW deeparg_db 1 gi:168258996:gb:ACA23181.1: deeparg 1.0.2 gene_presence_detected tetracycline 243 271 CAW05ANXX170413:3:2213:5573:28523/1 100.0 HSM7J4M8 CLASS_A gi:511019447:ref:WP_016273783.1:|FEATURES|class_A|beta-lactam|class_A deeparg_db 1 gi:511019447:ref:WP_016273783.1: deeparg 1.0.2 gene_presence_detected beta-lactam 234 266 CAW05ANXX170413:4:2101:11889:11483/2 100.0 HSM7J4M8 TETW ACA23187|FEATURES|tetW|tetracycline|tetW deeparg_db 1 ACA23187 deeparg 1.0.2 gene_presence_detected tetracycline 458 494 CAVL1ANXX170419:8:1306:4592:97549/1 100.0 HSM7J4M8 TETW ACA23187|FEATURES|tetW|tetracycline|tetW deeparg_db 1 ACA23187 deeparg 1.0.2 gene_presence_detected tetracycline 250 282 CAW05ANXX170413:4:1203:5542:4495/2 100.0 HSM7J4M8 TETQ BAD46890|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 BAD46890 deeparg 1.0.2 gene_presence_detected tetracycline 84 116 CAW05ANXX170413:3:1315:16625:39188/2 100.0 HSM7J4M8 TETW gi:168258996:gb:ACA23181.1:|FEATURES|tetW|tetracycline|tetW deeparg_db 1 gi:168258996:gb:ACA23181.1: deeparg 1.0.2 gene_presence_detected tetracycline 599 630 CAW05ANXX170413:1:2305:16937:74810/1 100.0 HSM7J4M8 TETW ACA23187|FEATURES|tetW|tetracycline|tetW deeparg_db 1 ACA23187 deeparg 1.0.2 gene_presence_detected tetracycline 313 345 CAW05ANXX170413:4:1203:5542:4495/1 100.0 HSM7J4M8 TETQ BAD46890|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 BAD46890 deeparg 1.0.2 gene_presence_detected tetracycline 183 220 CAW05ANXX170413:2:1306:19124:85410/1 100.0 HSM7J4M8 ERMF ZP_04055482|FEATURES|ermF|MLS|ermF deeparg_db 1 ZP_04055482 deeparg 1.0.2 gene_presence_detected MLS 135 183 CAVL1ANXX170419:8:2311:2698:4881/1 100.0 HSM7J4M8 TETQ BAD46890|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 BAD46890 deeparg 1.0.2 gene_presence_detected tetracycline 549 581 CAVL1ANXX170419:7:2101:11775:63407/1 100.0 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 1066 1098 CAW05ANXX170413:3:2307:19659:86083/2 84.8 HSM7J4M8 TETQ BAD46890|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 BAD46890 deeparg 1.0.2 gene_presence_detected tetracycline 348 386 CAW05ANXX170413:4:2301:11928:92463/1 100.0 HSM7J4M8 TETW ABC18245|FEATURES|tetW|tetracycline|tetW deeparg_db 1 ABC18245 deeparg 1.0.2 gene_presence_detected tetracycline 479 502 CAW05ANXX170413:2:1213:3511:19878/1 100.0 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 566 598 CAW05ANXX170413:1:1112:3902:85304/2 84.8 HSM7J4M8 TETQ BAD46890|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 BAD46890 deeparg 1.0.2 gene_presence_detected tetracycline 268 300 CAW05ANXX170413:1:1101:13426:8340/2 100.0 HSM7J4M8 CFXA2 AF118110.1.gene1.p01|FEATURES|CfxA2|beta-lactam|CfxA2 deeparg_db 1 AF118110.1.gene1.p01 deeparg 1.0.2 gene_presence_detected beta-lactam 216 252 CAVL1ANXX170419:7:1111:14132:96304/1 100.0 HSM7J4M8 TETQ BAD46890|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 BAD46890 deeparg 1.0.2 gene_presence_detected tetracycline 239 271 CAW05ANXX170413:1:1101:13426:8340/1 100.0 HSM7J4M8 TETM AAR29970|FEATURES|tetM|tetracycline|tetM deeparg_db 1 AAR29970 deeparg 1.0.2 gene_presence_detected tetracycline 506 560 CAW05ANXX170413:3:2116:6868:46858/1 96.4 HSM7J4M8 ERMF ZP_04055482|FEATURES|ermF|MLS|ermF deeparg_db 1 ZP_04055482 deeparg 1.0.2 gene_presence_detected MLS 46 95 CAW05ANXX170413:4:1115:19271:81085/1 98.0 HSM7J4M8 CFXA2 AF118110.1.gene1.p01|FEATURES|CfxA2|beta-lactam|CfxA2 deeparg_db 1 AF118110.1.gene1.p01 deeparg 1.0.2 gene_presence_detected beta-lactam 192 224 CAW05ANXX170413:1:1110:9955:90492/2 100.0 HSM7J4M8 CFXA2 AF118110.1.gene1.p01|FEATURES|CfxA2|beta-lactam|CfxA2 deeparg_db 1 AF118110.1.gene1.p01 deeparg 1.0.2 gene_presence_detected beta-lactam 225 257 CAW05ANXX170413:1:1110:9955:90492/1 100.0 HSM7J4M8 CLASS_A gi:511019447:ref:WP_016273783.1:|FEATURES|class_A|beta-lactam|class_A deeparg_db 1 gi:511019447:ref:WP_016273783.1: deeparg 1.0.2 gene_presence_detected beta-lactam 59 88 CAW05ANXX170413:1:2104:12338:89489/1 100.0 HSM7J4M8 ERMF Q02607|FEATURES|ermF|MLS|ermF deeparg_db 1 Q02607 deeparg 1.0.2 gene_presence_detected MLS 115 148 CAW05ANXX170413:4:2316:15733:89046/1 100.0 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 1011 1043 CAW05ANXX170413:2:2106:1304:36748/2 90.9 HSM7J4M8 ERMF ZP_04055482|FEATURES|ermF|MLS|ermF deeparg_db 1 ZP_04055482 deeparg 1.0.2 gene_presence_detected MLS 1 32 CAVL1ANXX170419:7:2215:5172:88650/1 100.0 HSM7J4M8 TETW ABC18245|FEATURES|tetW|tetracycline|tetW deeparg_db 1 ABC18245 deeparg 1.0.2 gene_presence_detected tetracycline 449 480 CAW05ANXX170413:2:2211:9373:48167/2 100.0 HSM7J4M8 TETW ABC18245|FEATURES|tetW|tetracycline|tetW deeparg_db 1 ABC18245 deeparg 1.0.2 gene_presence_detected tetracycline 448 480 CAW05ANXX170413:2:2211:9373:48167/1 100.0 HSM7J4M8 KASUGAMYCIN_RESISTANCE_PROTEIN_KSGA A7FMC1|FEATURES|kasugamycin_resistance_protein_ksgA|aminoglycoside|kasugamycin_resistance_protein_ksgA deeparg_db 1 A7FMC1 deeparg 1.0.2 gene_presence_detected aminoglycoside 108 139 CAW05ANXX170413:1:2204:10841:3109/2 87.5 HSM7J4M8 TETW ACA23187|FEATURES|tetW|tetracycline|tetW deeparg_db 1 ACA23187 deeparg 1.0.2 gene_presence_detected tetracycline 91 123 CAVL1ANXX170419:7:1302:11559:33404/1 100.0 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 458 488 CAW05ANXX170413:1:1205:4684:84705/2 83.9 HSM7J4M8 TETW ACA23187|FEATURES|tetW|tetracycline|tetW deeparg_db 1 ACA23187 deeparg 1.0.2 gene_presence_detected tetracycline 54 86 CAVL1ANXX170419:7:1302:11559:33404/2 100.0 HSM7J4M8 TETA(46) AET10444.1|FEATURES|tetA(46)|tetracycline|tetA(46) deeparg_db 1 AET10444.1 deeparg 1.0.2 gene_presence_detected tetracycline 161 199 CAW05ANXX170413:4:2107:18308:23682/1 100.0 HSM7J4M8 CFXA2 AF118110.1.gene1.p01|FEATURES|CfxA2|beta-lactam|CfxA2 deeparg_db 1 AF118110.1.gene1.p01 deeparg 1.0.2 gene_presence_detected beta-lactam 226 258 CAW05ANXX170413:2:1105:18339:28347/2 100.0 HSM7J4M8 BACA YP_002937728|FEATURES|bacA|bacitracin|bacA deeparg_db 1 YP_002937728 deeparg 1.0.2 gene_presence_detected bacitracin 121 153 CAVL1ANXX170419:8:2302:5224:83125/2 100.0 HSM7J4M8 BACA YP_002937728|FEATURES|bacA|bacitracin|bacA deeparg_db 1 YP_002937728 deeparg 1.0.2 gene_presence_detected bacitracin 165 197 CAVL1ANXX170419:8:2302:5224:83125/1 100.0 HSM7J4M8 VANU DQ212986.1.gene3.p01|FEATURES|vanU|glycopeptide|vanU deeparg_db 1 DQ212986.1.gene3.p01 deeparg 1.0.2 gene_presence_detected glycopeptide 1 48 CAW05ANXX170413:4:2101:9750:49063/1 81.2 HSM7J4M8 ERMF ZP_04055482|FEATURES|ermF|MLS|ermF deeparg_db 1 ZP_04055482 deeparg 1.0.2 gene_presence_detected MLS 1 31 CAW05ANXX170413:2:2107:8039:8913/1 100.0 HSM7J4M8 PBP-1A YP_001292390|FEATURES|PBP-1A|beta-lactam|PBP-1A deeparg_db 1 YP_001292390 deeparg 1.0.2 gene_presence_detected beta-lactam 507 539 CAW05ANXX170413:4:1212:12020:16066/2 87.9 HSM7J4M8 PBP-1A YP_001292390|FEATURES|PBP-1A|beta-lactam|PBP-1A deeparg_db 1 YP_001292390 deeparg 1.0.2 gene_presence_detected beta-lactam 554 586 CAW05ANXX170413:4:1212:12020:16066/1 93.9 HSM7J4M8 CFXA2 AF118110.1.gene1.p01|FEATURES|CfxA2|beta-lactam|CfxA2 deeparg_db 1 AF118110.1.gene1.p01 deeparg 1.0.2 gene_presence_detected beta-lactam 91 123 CAW05ANXX170413:3:2205:7646:25632/1 97.0 HSM7J4M8 CFXA2 AF118110.1.gene1.p01|FEATURES|CfxA2|beta-lactam|CfxA2 deeparg_db 1 AF118110.1.gene1.p01 deeparg 1.0.2 gene_presence_detected beta-lactam 52 84 CAW05ANXX170413:3:2205:7646:25632/2 100.0 HSM7J4M8 TETQ BAD46890|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 BAD46890 deeparg 1.0.2 gene_presence_detected tetracycline 177 216 CAW05ANXX170413:2:1208:17315:52804/1 100.0 HSM7J4M8 BACA ZP_04528247|FEATURES|bacA|bacitracin|bacA deeparg_db 1 ZP_04528247 deeparg 1.0.2 gene_presence_detected bacitracin 5 66 CAW05ANXX170413:4:2216:5306:50848/1 80.6 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 768 808 CAW05ANXX170413:2:2112:12324:87930/1 85.4 HSM7J4M8 ERMG M15332.gene.p01|FEATURES|ermG|MLS|ermG deeparg_db 1 M15332.gene.p01 deeparg 1.0.2 gene_presence_detected MLS 39 74 CAW05ANXX170413:3:2105:17340:67174/1 100.0 HSM7J4M8 TETQ BAD46890|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 BAD46890 deeparg 1.0.2 gene_presence_detected tetracycline 348 380 CAW05ANXX170413:4:1112:7078:80745/2 100.0 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 1035 1063 CAVL1ANXX170419:8:2213:17232:21560/1 89.7 HSM7J4M8 ERMB gi:494752321:ref:WP_007487729.1:|FEATURES|ermB|MLS|ermB deeparg_db 1 gi:494752321:ref:WP_007487729.1: deeparg 1.0.2 gene_presence_detected MLS 100 132 CAW05ANXX170413:4:2201:13207:98133/1 100.0 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 744 782 CAVL1ANXX170419:7:2201:7806:78313/1 82.1 HSM7J4M8 TETM AAR29970|FEATURES|tetM|tetracycline|tetM deeparg_db 1 AAR29970 deeparg 1.0.2 gene_presence_detected tetracycline 22 66 CAVL1ANXX170419:7:2109:18195:11451/1 95.6 HSM7J4M8 LNUC AAY32951.1|FEATURES|lnuC|MLS|lnuC deeparg_db 1 AAY32951.1 deeparg 1.0.2 gene_presence_detected MLS 77 109 CAW05ANXX170413:4:2314:4602:75128/2 100.0 HSM7J4M8 TETM AAR29970|FEATURES|tetM|tetracycline|tetM deeparg_db 1 AAR29970 deeparg 1.0.2 gene_presence_detected tetracycline 46 78 CAW05ANXX170413:3:1201:14144:58887/2 97.0 HSM7J4M8 TETM AAR29970|FEATURES|tetM|tetracycline|tetM deeparg_db 1 AAR29970 deeparg 1.0.2 gene_presence_detected tetracycline 79 111 CAW05ANXX170413:3:1201:14144:58887/1 100.0 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 432 477 CAVL1ANXX170419:8:2306:18869:92753/1 91.3 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 1033 1065 CAW05ANXX170413:3:2110:20339:63933/2 84.8 HSM7J4M8 CFXA2 AF118110.1.gene1.p01|FEATURES|CfxA2|beta-lactam|CfxA2 deeparg_db 1 AF118110.1.gene1.p01 deeparg 1.0.2 gene_presence_detected beta-lactam 190 222 CAW05ANXX170413:2:1303:5753:29418/1 100.0 HSM7J4M8 CFXA2 AF118110.1.gene1.p01|FEATURES|CfxA2|beta-lactam|CfxA2 deeparg_db 1 AF118110.1.gene1.p01 deeparg 1.0.2 gene_presence_detected beta-lactam 257 289 CAW05ANXX170413:2:1303:5753:29418/2 100.0 HSM7J4M8 TETW CAO78565|FEATURES|tetW|tetracycline|tetW deeparg_db 1 CAO78565 deeparg 1.0.2 gene_presence_detected tetracycline 398 450 CAW05ANXX170413:1:1211:13666:30369/1 100.0 HSM7J4M8 KASUGAMYCIN_RESISTANCE_PROTEIN_KSGA A7FMC1|FEATURES|kasugamycin_resistance_protein_ksgA|aminoglycoside|kasugamycin_resistance_protein_ksgA deeparg_db 1 A7FMC1 deeparg 1.0.2 gene_presence_detected aminoglycoside 152 187 CAW05ANXX170413:2:1304:9650:95878/1 80.6 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 768 800 CAVL1ANXX170419:7:2204:4178:18230/2 87.9 HSM7J4M8 TETW gi:168258996:gb:ACA23181.1:|FEATURES|tetW|tetracycline|tetW deeparg_db 1 gi:168258996:gb:ACA23181.1: deeparg 1.0.2 gene_presence_detected tetracycline 349 381 CAW05ANXX170413:3:1314:11295:28913/2 100.0 HSM7J4M8 TETW gi:168258996:gb:ACA23181.1:|FEATURES|tetW|tetracycline|tetW deeparg_db 1 gi:168258996:gb:ACA23181.1: deeparg 1.0.2 gene_presence_detected tetracycline 315 347 CAW05ANXX170413:3:1314:11295:28913/1 100.0 HSM7J4M8 TETQ BAD46890|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 BAD46890 deeparg 1.0.2 gene_presence_detected tetracycline 150 189 CAW05ANXX170413:3:2205:5211:23750/1 97.5 HSM7J4M8 TET32 ABV82118|FEATURES|tet32|tetracycline|tet32 deeparg_db 1 ABV82118 deeparg 1.0.2 gene_presence_detected tetracycline 133 165 CAVL1ANXX170419:7:1215:13452:55459/1 100.0 HSM7J4M8 TETQ BAD46890|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 BAD46890 deeparg 1.0.2 gene_presence_detected tetracycline 109 150 CAW05ANXX170413:1:1207:3793:26741/1 100.0 HSM7J4M8 UGD AAC75089.1|FEATURES|ugd|peptide|ugd deeparg_db 1 AAC75089.1 deeparg 1.0.2 gene_presence_detected peptide 230 262 CAW05ANXX170413:4:2307:19282:72087/2 90.9 HSM7J4M8 ERMF Q02607|FEATURES|ermF|MLS|ermF deeparg_db 1 Q02607 deeparg 1.0.2 gene_presence_detected MLS 179 235 CAW05ANXX170413:4:2209:12378:13125/1 100.0 HSM7J4M8 CFXA2 AY769933.1.gene1.p01|FEATURES|CfxA2|beta-lactam|CfxA2 deeparg_db 1 AY769933.1.gene1.p01 deeparg 1.0.2 gene_presence_detected beta-lactam 145 174 CAW05ANXX170413:4:1109:11895:18811/1 100.0 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 432 463 CAVL1ANXX170419:7:1104:3594:54825/2 87.5 HSM7J4M8 CFXA2 AF118110.1.gene1.p01|FEATURES|CfxA2|beta-lactam|CfxA2 deeparg_db 1 AF118110.1.gene1.p01 deeparg 1.0.2 gene_presence_detected beta-lactam 154 202 CAW05ANXX170413:4:2307:3068:73276/1 98.0 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 143 175 CAW05ANXX170413:4:1214:2819:98466/1 84.8 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 1066 1101 CAW05ANXX170413:1:1102:10487:59991/1 80.6 HSM7J4M8 TETQ BAD46890|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 BAD46890 deeparg 1.0.2 gene_presence_detected tetracycline 578 610 CAVL1ANXX170419:8:1106:3865:26466/1 100.0 HSM7J4M8 TETQ BAD46890|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 BAD46890 deeparg 1.0.2 gene_presence_detected tetracycline 578 610 CAVL1ANXX170419:8:1106:3865:26466/2 100.0 HSM7J4M8 TETQ BAD46890|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 BAD46890 deeparg 1.0.2 gene_presence_detected tetracycline 97 129 CAW05ANXX170413:3:1307:3879:36407/1 100.0 HSM7J4M8 TETQ Z21523.gene.p01|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 Z21523.gene.p01 deeparg 1.0.2 gene_presence_detected tetracycline 21 53 CAW05ANXX170413:3:1307:3879:36407/2 100.0 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 1017 1049 CAW05ANXX170413:4:2210:5154:42720/1 93.9 HSM7J4M8 TETQ ZP_04557016|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 ZP_04557016 deeparg 1.0.2 gene_presence_detected tetracycline 245 275 CAW05ANXX170413:4:2109:16067:23574/1 96.8 HSM7J4M8 TETQ BAD46890|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 BAD46890 deeparg 1.0.2 gene_presence_detected tetracycline 547 579 CAVL1ANXX170419:8:1310:19520:23144/1 100.0 HSM7J4M8 RPOB2 BAD59497.1|FEATURES|rpoB2|multidrug|rpoB2 deeparg_db 1 BAD59497.1 deeparg 1.0.2 gene_presence_detected multidrug 786 817 CAW05ANXX170413:2:2307:7561:79956/1 96.9 HSM7J4M8 TETQ Z21523.gene.p01|FEATURES|tetQ|tetracycline|tetQ deeparg_db 1 Z21523.gene.p01 deeparg 1.0.2 gene_presence_detected tetracycline 489 521 CAW05ANXX170413:3:2104:12736:98854/2 100.0