comparison macros.xml @ 4:31f8063eedea draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/arriba commit 7943aa76786271a466aa1b0e2c8fac3f32176863

3:765e685641ce

<macros>
    <token name="@TOOL_VERSION@">2.3.0</token>
    <token name="@VERSION_SUFFIX@">3</token>
    <xml name="requirements">
        <requirements>
        <requirement type="package" version="@TOOL_VERSION@">arriba</requirement>
            <yield/>
        </requirements>

                             which reflect the actual isoforms involved in a fusion.
\                            As a third option, the transcripts that are annotated as canonical can be drawn.
                             Transcript isoforms tagged with appris_principal, appris_candidate, or CCDS are considered canonical.
                        </help>
                        <option value="coverage">coverage</option>
                        <option value="provided">provided</option>
                        <option value="canonical">canonical</option>
                    </param>
                    <param argument="--minConfidenceForCircosPlot" type="select" optional="true" label="Transcript selection">
                        <help>The fusion of interest is drawn as a solid line in the circos plot.
                              To give an impression of the overall degree of rearrangement,

4:31f8063eedea

<macros>
    <token name="@TOOL_VERSION@">2.4.0</token>
    <token name="@VERSION_SUFFIX@">0</token>
    <xml name="requirements">
        <requirements>
        <requirement type="package" version="@TOOL_VERSION@">arriba</requirement>
            <yield/>
        </requirements>

                             which reflect the actual isoforms involved in a fusion.
\                            As a third option, the transcripts that are annotated as canonical can be drawn.
                             Transcript isoforms tagged with appris_principal, appris_candidate, or CCDS are considered canonical.
                        </help>
                        <option value="coverage">coverage</option>
                        <option value="provided" selected="true">provided</option>
                        <option value="canonical">canonical</option>
                    </param>
                    <param argument="--minConfidenceForCircosPlot" type="select" optional="true" label="Transcript selection">
                        <help>The fusion of interest is drawn as a solid line in the circos plot.
                              To give an impression of the overall degree of rearrangement,