Mercurial > repos > iuc > bakta
comparison test-data/TEST_4/TEST_4.log @ 1:da5f1924bb2e draft
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/bakta commit 0ef6e6b2dcc9a41b32741368a60b931f31934686
author | iuc |
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date | Fri, 16 Sep 2022 13:42:15 +0000 |
parents | 1a27ad3d0cdf |
children | 865ece5ca178 |
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0:1a27ad3d0cdf | 1:da5f1924bb2e |
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27 conduct expert systems... | 27 conduct expert systems... |
28 amrfinder: 0 | 28 amrfinder: 0 |
29 protein sequences: 0 | 29 protein sequences: 0 |
30 user protein sequences: 0 | 30 user protein sequences: 0 |
31 combine annotations and mark hypotheticals... | 31 combine annotations and mark hypotheticals... |
32 analyze hypothetical proteins: 2 | 32 detect pseudogenes... |
33 pseudogene candidates: 0 | |
34 found pseudogenes: 0 | |
35 analyze hypothetical proteins: 2 | |
33 detected Pfam hits: 0 | 36 detected Pfam hits: 0 |
34 calculated proteins statistics | 37 calculated proteins statistics |
35 revise special cases... | 38 revise special cases... |
36 extract sORF... | 39 extract sORF... |
37 potential: 16 | 40 potential: 16 |
67 ncRNAs: 0 | 70 ncRNAs: 0 |
68 ncRNA regions: 0 | 71 ncRNA regions: 0 |
69 CRISPR arrays: 0 | 72 CRISPR arrays: 0 |
70 CDSs: 2 | 73 CDSs: 2 |
71 hypotheticals: 2 | 74 hypotheticals: 2 |
75 pseudogenes: 0 | |
72 signal peptides: 0 | 76 signal peptides: 0 |
73 sORFs: 0 | 77 sORFs: 0 |
74 gaps: 0 | 78 gaps: 0 |
75 oriCs/oriVs: 0 | 79 oriCs/oriVs: 0 |
76 oriTs: 0 | 80 oriTs: 0 |
77 | 81 |
78 export annotation results to: /tmp/tmpb092rhfs/job_working_directory/000/12/working | 82 export annotation results to: /tmp/tmpmnqj1xog/job_working_directory/000/12/working |
79 human readable TSV... | 83 human readable TSV... |
80 GFF3... | 84 GFF3... |
81 INSDC GenBank & EMBL... | 85 INSDC GenBank & EMBL... |
82 genome sequences... | 86 genome sequences... |
83 feature nucleotide sequences... | 87 feature nucleotide sequences... |