Mercurial > repos > iuc > bakta
diff test-data/tmp/TEST_3/TEST_3.log @ 0:1a27ad3d0cdf draft
planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/bakta commit 7d595b05b8d595f554b57dadbf1beb0b39733af3
| author | iuc |
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| date | Thu, 01 Sep 2022 17:28:43 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/tmp/TEST_3/TEST_3.log Thu Sep 01 17:28:43 2022 +0000 @@ -0,0 +1,55 @@ +parse genome sequences... + imported: 1 + filtered & revised: 1 + plasmids: 1 + +start annotation... +skip tRNA prediction... +skip tmRNA prediction... +skip rRNA prediction... +skip ncRNA prediction... +skip ncRNA region prediction... +skip CRISPR array prediction... +skip CDS prediction... +skip sORF prediction... +skip gap annotation... +skip oriC/T annotation... +apply feature overlap filters... +select features and create locus tags... +selected: 0 + +genome statistics: + Genome size: 1,330 bp + Contigs/replicons: 1 + GC: 45.2 % + N50: 1,330 + N ratio: 0.0 % + coding density: 0.0 % + +annotation summary: + tRNAs: 0 + tmRNAs: 0 + rRNAs: 0 + ncRNAs: 0 + ncRNA regions: 0 + CRISPR arrays: 0 + CDSs: 0 + hypotheticals: 0 + signal peptides: 0 + sORFs: 0 + gaps: 0 + oriCs/oriVs: 0 + oriTs: 0 + +export annotation results to: /tmp/tmpqcic3cc5/job_working_directory/000/6/working + human readable TSV... + GFF3... + INSDC GenBank & EMBL... + genome sequences... + feature nucleotide sequences... + translated CDS sequences... + machine readable JSON... + genome and annotation summary... + +If you use these results please cite Bakta: https://doi.org/10.1099/mgen.0.000685 +Annotation successfully finished in 0:00 [mm:ss].